Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01779 ATGATGCATCTCGAAGATACTCCTTCCTCTCTTGGATTTCACATGCCTGCAGAATGGGAACCCCATACGCAGTGTTGGATGGGTTGGCCTGAACGCGCTGATAATTGGCGTGACAACGCCGTTCATGCTCAACGTGTGTTTGTTAGGGTGGCGTCCGCGATCTCCAGATTCGAGAGAGTAACCGTTTGCGCTTGTTCCGCTCAATGGGAGAATGCTCGGAGTCAGTTACCAGAGCATATCAGAGTCATTGAGATTTGCTCTAATGATTCTTGGTTTCGTGACATTGGACCTACTTTTGTTGTGAAAAGAGGAACGCCGGAATCTGGTGATACGGAACATAGGATTGCGGGGATTGATTGGAGTTTTAATAGTTGGGGAGGTGTAGAAGATGGATGTTACAGTGATTGGAGTCTTGATACCTATGTTGCTAAGAAGATTTTGGATGTTGAGAGAATTCCTAGGTTTTCGCATTCTATGGTGCTTGAAGGCGGAAGCATCCATGTGGATGGAGAAGGAACATGTCTTACCACAGAAGAGTGTCTATTGAACAAGAACAGGAATCCTCATTTGAGTAAGAGCCAAATAGAGGATGAACTTAAGGCATATCTTGGAATCAGGAAGGTTATATGGTTGCCTCGTGGATTATATGGAGATGACGATACAAATGGTCATATTGATAACATCTGCTGTTTTGCGAGGCCCGGTGTGGTTCTGCTATCTTGGACTGATGATAAAACTGATCCTCAGTATGAAATATCTGAAGAAGCATATGTTTTCCTTTCAAGTGTAACAGATGCTAATGGTAGAAAATTGGAAATCATTAAACTCCATGTCCCGGATCCACTATACATGACGGAGAAAGAGGCTGCGGGGGTTTTCCAGGATGACTGCGCCAAGCCAAGACTTCCCGGTACTAGGCTTGCTGCTTCATATGTAAACTTTTACATTGCAAATGGTGCTATTGTTGTTCCAAAATTTGGAGATAAAAAGTGGGATGATGAAGCTATCAGAGTTCTGTCTAAGACGTTTCCTCATCATGAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTATTGTCAGGTGGAAATATACATTGCATCACTCAGCAACAACCAGCCATTTAG 1125 0.4364 MMHLEDTPSSLGFHMPAEWEPHTQCWMGWPERADNWRDNAVHAQRVFVRVASAISRFERVTVCACSAQWENARSQLPEHIRVIEICSNDSWFRDIGPTFVVKRGTPESGDTEHRIAGIDWSFNSWGGVEDGCYSDWSLDTYVAKKILDVERIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKSQIEDELKAYLGIRKVIWLPRGLYGDDDTNGHIDNICCFARPGVVLLSWTDDKTDPQYEISEEAYVFLSSVTDANGRKLEIIKLHVPDPLYMTEKEAAGVFQDDCAKPRLPGTRLAASYVNFYIANGAIVVPKFGDKKWDDEAIRVLSKTFPHHEVVGIEGSREIVLSGGNIHCITQQQPAI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01779 374 Hamap Agmatine deiminase [aguA]. 6 373 IPR017754 GO:0009446|GO:0047632
Vivi1g01779 374 Gene3D - 3 374 - -
Vivi1g01779 374 SUPERFAMILY Pentein 2 373 - -
Vivi1g01779 374 Pfam Porphyromonas-type peptidyl-arginine deiminase 14 372 IPR007466 GO:0004668|GO:0009446
Vivi1g01779 374 NCBIfam agmatine deiminase 7 373 IPR017754 GO:0009446|GO:0047632
Vivi1g01779 374 PANTHER AGMATINE DEIMINASE-RELATED 1 373 IPR007466 GO:0004668|GO:0009446
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01779 Vivi-Chr1 38091796 38112464 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01779 K10536 - gmx:100811750 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01779 1 38091796 38112464 Vivi1g01779 1 38091796 38112464 ECH