Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01771 ATGGAGGGAAGCGAGAGCGAGAGCGAGAGCTATGCGATTTTCAAATCGCTGAATTTGAATCCTCAACTCTTCTTTAACGAAATTTTCAACACCGCCGACGATTTGTTAATCGAAACTTTTGATTTCATCTTCCGGGAAGCATCTACCAAGCTCAACGTGGAAGCTAGCCAAAAATCTCAACATCTCAAACAGGGTATTGATCACATTCGACAAAATGTTCAATCAGTTGCGGATCAAAAGCTTTCAGTTTGGGAAGAATACTGCCTTTATCATTGTTTTTCTCTTCCCAAAGGGTTTCAAATGCCAAATACTGATGAATTGGGTGGGAATGACATCGATCTTGTAGCTACTTCCCATGAAGAACTAGATGCTGAGTTAGAATCATTGAGGGAAAAATTAGCCGAGGTGGGGAAAGAATCGGAAATGCTAAATCAAGAAATTGAGGCACTCCCCAAGCATTCTTCTCTCAATGCTCTACATATCAATGAAGCAGTTCAATTACTTGAGCAAAACTCTGAGTTGTTTCAGGAGGTTTTGACAACTGCCCGAGAACTTCGACTGAAGATTGGAAAGCAAAACACCAACATGATTGAAGAGACCGAAGAAATGAAAGCAAGAAGTTTCAACAACTATACAATGGATACTTCTGCTAAAGGCCTCTCAAATATGAAATTAGAAGATCTTCAACGATTTGTAACCCAGTTGGAGTGA 711 0.4008 MEGSESESESYAIFKSLNLNPQLFFNEIFNTADDLLIETFDFIFREASTKLNVEASQKSQHLKQGIDHIRQNVQSVADQKLSVWEEYCLYHCFSLPKGFQMPNTDELGGNDIDLVATSHEELDAELESLREKLAEVGKESEMLNQEIEALPKHSSLNALHINEAVQLLEQNSELFQEVLTTARELRLKIGKQNTNMIEETEEMKARSFNNYTMDTSAKGLSNMKLEDLQRFVTQLE 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01771 236 Coils Coil 112 146 - -
Vivi1g01771 236 Pfam Mis12 protein 14 144 IPR008685 GO:0000278|GO:0000775|GO:0005634
Vivi1g01771 236 PANTHER PROTEIN MIS12 HOMOLOG 1 230 IPR008685 GO:0000278|GO:0000775|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01771 Vivi-Chr1 38041933 38043487 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01771 - - gmx:100306256 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01771 1 38041933 38043487 Vivi1g01771 1 38041933 38043487 ECH