Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01743 ATGAACCAAGATTCAGAGAAGCGATTTCGCTCCATCATGGATAAGCTCTTCCATTCATCCAAATCTTCCTCCAACAATCCTTCATTCTCCAACTCCAGTTCTTCGGGGGTGCAGTTATCAAGTTCCAGGGGTAAGAAACGTGGTTTTCAGTCAATTGTATCAGGATCAGGAGGAGTAATGGATAGGAGAGGGGATGATCAGTCATCTTCAGTTACTGCAGCGGAATCTCAAGGTCATCTATGTCGACCGTGGGATCGCGCTGACTTTATGAAGAGATTGGCTACATTTAAGTCTATTTCATGGTTTGCTAAACCCAAGAAAGTAAGTGCTGTCAATTGTGCTAGAAGAGGTTGGATCAATGTGGACGTTGACACAATAGCTTGTGAAGAATGTGGTGCACGTCTTCTGTTCTCTACACCAGCATCTTGGAATCACCAGCAGGTGGAGAAGGCAGCTATAGTCTTCAGTTTAAAGTTGGATAATGGACATAAATTACTTTGTCCGTGGATTGACAATGCCTGTAGTGAAACCCTAGCACGGTTTCCTCCCATATCTCCTCCAGCATTAGTTCATAATTTCAGAGAACGTTGTTCTGCTCTCTTGCAATTGTCCGCTCTTCCGCGTATTTCATCTTCTGTAATTGACCACATGCAAAGCCCACTTCTGGGTGACTTCCTTGAACAATCATTGATGCAGGAGTGTGGAAATGAATCAGCCGGAAATTCTGGAATAGAAGATGCTGATAGTCAAGAGAAACTGAAATTATATTACCAGGCTCAAAGGCTAATAAGTTTATGCGGTTGGGAACTCCGTTATTTACCTTATGCGGTTGATTGCAAAAATGTATCAGGACAGTCGCATAAAAATTCAACTATTCTATACTGTCCTCAAGTAGTCCCTGATGCAAAGAATGACAATCTCGTTGTCTCTTCTGCTGACAATAATGAAGGTTCGAAAATGGATGAAAATACCAAGTATTCTTTTGGGGAACAAATGGATCCCAATTCTGCAGTTTTAGATTGTTCCTTATGTGGAGCCACTGTTGGATTGTGGGCATTCTGTACAGTTCTCCGGCCTGTGCAATCAATCAGATTAGTAGGATATGCAGAAGTGAATGGTGAAAATGATCTTGAAAATAGACAGGAGGGAATAAATAATGCCATGTCCGACGTTGCAACTTCATCTAAGGATACACCTTCGAGTCTAAATATGACAATTGCAGGGGGTCCTCCCCCAACAAAGCAAAACTTCAAAGCAATAATATCTTTGCCTGTCATTGGTCAAAATTTGAGAGCTCGTCTTTCTTATGATTATGATATTAGAGATCATTTTTTTGTTGATCAGGGTAGTAGTCAGTCAGCTTCACATGAGATCGGGATTCAGGAGAAAACTGACAACACAGTTAATGCCTCTATTGGACAACTTGTTCATGTATCGTCTGAAATAAGAGAAATTTCAAATTATGAAACTGGCTCTCAAGCAAGCATTCACGACTCGGTTGTAGATAATGCTTTAGAGGGCACTAATTCTGCAGGACAATCATCTAGTTTTAAGGACAAGATGCCCATCCAAGCTAAAACTGATGGATTGAAGATTTCATCTGTAGGAAATCCTAGTAGCTCTCAGAAAAACTTGGCAGAAGATGAAACACTTTCTGTTTCATATAAGACCAAAGAAGCCAGTAACATTGAAACTCCGGGGGTGAAAGAAAGAGTAGAGAACCCAACTCACAGTGAAGATGTACATAATAGTTTAGGTAAGTTTAAAAATCCAACACTGTCTGAGAAAGCAATGGAATTTGATCCAATCAGACAGCACAGACACTTCTGCCCGTGGATTGCATCGGAAGACGATGGGGAGCCTGGGTGGAAACAAACGTTATCTGCTCTGTATCGTCCAAAAGAACATTCACCACATTCCCCAAATACATCTCCATCATCAGTGCCCATCATTAAGGTTGATGACCCTATTGGTTCAATCAGAAAGCTTTTCAAGTCTCCACCTACAAGAAGAATGAAGCTTACTCACATTTCGAGTCAAAATGTAGAGCATGGGTAG 2058 0.4121 MNQDSEKRFRSIMDKLFHSSKSSSNNPSFSNSSSSGVQLSSSRGKKRGFQSIVSGSGGVMDRRGDDQSSSVTAAESQGHLCRPWDRADFMKRLATFKSISWFAKPKKVSAVNCARRGWINVDVDTIACEECGARLLFSTPASWNHQQVEKAAIVFSLKLDNGHKLLCPWIDNACSETLARFPPISPPALVHNFRERCSALLQLSALPRISSSVIDHMQSPLLGDFLEQSLMQECGNESAGNSGIEDADSQEKLKLYYQAQRLISLCGWELRYLPYAVDCKNVSGQSHKNSTILYCPQVVPDAKNDNLVVSSADNNEGSKMDENTKYSFGEQMDPNSAVLDCSLCGATVGLWAFCTVLRPVQSIRLVGYAEVNGENDLENRQEGINNAMSDVATSSKDTPSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLRARLSYDYDIRDHFFVDQGSSQSASHEIGIQEKTDNTVNASIGQLVHVSSEIREISNYETGSQASIHDSVVDNALEGTNSAGQSSSFKDKMPIQAKTDGLKISSVGNPSSSQKNLAEDETLSVSYKTKEASNIETPGVKERVENPTHSEDVHNSLGKFKNPTLSEKAMEFDPIRQHRHFCPWIASEDDGEPGWKQTLSALYRPKEHSPHSPNTSPSSVPIIKVDDPIGSIRKLFKSPPTRRMKLTHISSQNVEHG 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01743 685 Pfam C3HC zinc finger-like 83 206 IPR012935 GO:0008270
Vivi1g01743 685 MobiDBLite consensus disorder prediction 16 49 - -
Vivi1g01743 685 MobiDBLite consensus disorder prediction 1 74 - -
Vivi1g01743 685 MobiDBLite consensus disorder prediction 1 15 - -
Vivi1g01743 685 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 675 - -
Vivi1g01743 685 MobiDBLite consensus disorder prediction 633 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01743 Vivi-Chr1 37622258 37627151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01743 - - tpra:123921272 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01743 1 37622258 37627151 Vivi1g01743 1 37622258 37627151 ECH