Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01734 ATGGCCGATCTCAACCAAACCCCACCCCAACCATACAGACCCACCTCCTCACCATCCGTCTTTCTAAGAAAGCTTCAAAACAACCTTCACGCACCAAACTCAACACATCTCGCTGCCATCTTAACCCTTCTCGTCACCGGATCCGTTTTCCTCCTTCTCACCAGTCTAACCGTAGCTGGCACCGTTCTCTCTCTCATCTTCTTCTCACCCTTGATAATCGTTTCAAGCCCCATATGGGTCCCGGCCGGTACTTTTTTCTTCCTCCTAACCGCCGGACTCTTGTCAATGTGTGGATTTGGCGTCATCGCTGTCGTTGCTTCGTCTTGGTTGTACCGTTACTTTAGAGGTCTTCACCCGCCCGGTTCGGACCGGGTTGATTACGCTAGACACCGGATTTACGATACGGCTACGCATGTTAGAGATTATGCAAAAGAATATGGCGGGTATTTGCAGAGTAAGGTCAAGGATGCAGCGCCTGGTGCTTGA 486 0.5082 MADLNQTPPQPYRPTSSPSVFLRKLQNNLHAPNSTHLAAILTLLVTGSVFLLLTSLTVAGTVLSLIFFSPLIIVSSPIWVPAGTFFFLLTAGLLSMCGFGVIAVVASSWLYRYFRGLHPPGSDRVDYARHRIYDTATHVRDYAKEYGGYLQSKVKDAAPGA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01734 161 PANTHER OLEOSIN 28 156 IPR000136 GO:0012511|GO:0016020
Vivi1g01734 161 Pfam Oleosin 37 147 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01734 Vivi-Chr1 37570062 37570917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01734 15 161 Lipid Metabolism Gene Families AT3G18570 50.000 3.57e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01734 - - tpra:123921957 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01734 1 37570062 37570917 Vivi1g01734 1 37570062 37570917 ECH