Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01730 ATGAGGAGGGCAAGGTGTTGGTTCCCTTGTATAGATGATAATTTACAGCAATGCTGCTACGACTTGGAGTTCACTGTTGCACACAATCTTGTAGCTGTCAGTACTGGAAGCTTGTTATACCAGGTCTTAAGCAAGGACAATCCTCCCCGGAAAACATATGTCTATAAATTAGATGTTCCAGTTGCTGCAAGGTGGATATCGTTGGCGGTTGCCCCATTTGAACTTCTTCCCGATCACCAATTTGGCCTCATATCACATCTGTGTTTGGCTCCTAATCTGGCAAAAATGCGGCATACAGTGGATTTCTTCCATAATGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGACTCGTACAAGCAAGTTTTTGTAGAGCCTGAGATGGCAGTTTCATCATTGAGTTTAGGAGCCTCTATGAGTGTATTTAGTTCTCAAATTTTGTATGATGAGAAGGTTATTGACCAGACTATTGATACAAGGGTAAAACTTGCTTATGCCCTTGCAAGGCAGTGGTTTGGTGTGTATATCACTCCTGAGTCACCAAATGATGAGTGGCTCTTGGAAGGGCTTGCTGGTTTCTTGGCAGACTTTTTTATTAAGAAGCATTTGGGTAATAACGAGGCACGGTACCAGAGATATAAGGCAAATTGTTCTGTTTGCAAAGTTGATAACGGCGGAACAACAGTTTTGAGCTGTTCAGCTTCCTGTAAGGATTTATATGGAACACAGTGCATTGGGTTGTATGGAAAAATAAGAGCATGGAAGTCTGTGGCAGTTGTTCAGATGCTGGAAAAGCAAATGGGCCCTGAATCTTTCCGTAGAATTTTGCAAACTATAGTTACTCGGGCTCAAGATAAAGTACGCTCAGTGAAAACACTTAGTACTAAGGAGTTTCGACATTTTGCTAACAAGGTTGGAAATTTAGAACGTCCTTTTCTTAAAGATTTCTTCCCCCGTTGGGTCGGTTCTTGTGGATGTCCTAATTTAAGGATGGGGTTTTCCTATAATAAACGAAAGAATGTGGTTGAACTGGCTGTGTTGAGAGGATGCACAGCATTGCAAACTTCGAGTACAGCTGTTCTTGATATTAATCCAGATACTGAAAATCGAGATGCAGATTCTGGATGGCCTGGTATGATGAGTATAAGAGTATATGAACTTGATGGTATGTATGACCATCCTATTTTACCAATGGCTGGAGAAGCATGGCAGCTTTTGGAAATTCAATGCCACTCAAGGCTTGCTGCTAGACGGTTTCAAAAATCAAAAAAAGGTTTGAAACATGACGGCTCTGATGACAACGGTGACATGCCTTCAATGGATATACGCTCCAGTACCGAGTCCCCATTATTATGGATCAGAGCAGATCCTGACATGGAGTACCTTGCTGAGGTTCATTTTAATCAACCAGTTCAGATGTGGATTAACCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCCCAGCAATCATTTTCTGTTGTAAATGCCCTGAACAGTTTTCTTACCGACTCCAAGGCTTTCTGGAGAGTAAGAATCGAAGCAGCATTTGCATTGGCGAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAAAGTAGAAGATTTGATTCTGACATTGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCCGAGTATTTTGTTCTTGAGGCCATTCCACATGCTGTAGCTACGATTAGAGCCGCTGACAAGAAAAGTCCAAGAGAGGCTATTGATTTTGTTTTACAGCTATTAAAGTATAATGACAACACTGGCAACCCTTACTCAGATGTCTTCTGGCTTGCTGCACTGGTCCAATCAATTGGCGAGTTTGAGTTTGGGCAACAGAGTATTCTTCTATTGTCATCACTCCTCAAGCGCATTGACCGCCTTTTACAATTTGATAGTCTCATGCCAAGCTACAACGGAATCTTGACTGTCAGTTGTATCCGGACATTGGCCCAGATTGCCATAAAACTTTCAGGATTCATTCCTCTTGATCGCATATATGAACTTTTGAAGCCTTTTCGAGACCTAAAGGCAATTTGGCAAGTTCGAATCGAAGCAAACAGAGCACTCCTTGATCTCGAATTCCACTGCAAGGGCATTGATGCAGCACTTCTTTTATTTACCAAATATGTTGAGGAGGAACCTTCCCTGAGAGGCAAGTTAAAATTGGCCACCCATGTTATGAGGCTATGCCAGATGAGAGATGATTTGATTTCAAACGATGAAATTACAAGCCAAACACTCGTCTCCTTGCTCAATTTACTTGAGGGGCGTATGTCATTTAATAATGTCTTTCTCCGTCACTACTTGTTCTGCATATTACAAATACTGGCAAAAAGACCCCCAACTCTTCATGGAATTCCGAGAGAAAGTAGAACGTTGCACATGAGTCTTACAGAAGCTGGTAACTATCAGAGGAACCTATTTGTCCTTGATTCCGAAAATAAACCTTTGGAATTGCCAAATTCCACCCCAAATCTTACACAAGATTTGATTGTAACCGAGGGTTTTAGGGATGCACTTGATGAGGCTCCCAAGGACCAAGTTTTTGAAGCATCTATGGACCAAACCTTTGAAGCTCCCAAAGAAGTACATGTTGAAGCTTTAGAGGAAGCGCCCCAAGAGGCTCCCAAAGAGGACTTAACAGGATTCCCCCCTGAAGCACCAATTGAAGCTCCCAATGAAATTTACAAGGAAGCAGATACTGTATCCAATAGCCATGAAAGAAAAAGGCTAATCAAAATCAAGGTTAAACAATCTTCTGCCACCAGTAGGAGTAGGGCTGATACTGATAATCAAATGGTTGAGCGCTCTTTAGGTGGTCGTAATGATATTGATCATGGAGCTAGCAGTTCAGTCTCAGTTTCAGTAGATGCACCTCAGAGGAATTTTGCCGAGACTGTTAGCATCGGTAATCACAATATTGAAGAAGTTAATTCTTGGCATGATCCTGGTTCCCGCATGACTGCCAGCATCGGCAGTGCAAAAATTTTGGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCCGATTCAAGTGTAGTTTACTCACAACCTAGGCCTGAAGACCCATCACCATCTAGTATTATCCAGGATAACAAGCCATCTAGTATTATCCAGGATAACAATATAGATGCTGACGCACGGCGATTTGCCAGCCTTCAAACACTCTCAGTTGCTAGACTCGATCATGATGGAGAATCATTTGGCAAAGAAATTTCTGCACGCAGGAAAGAAAAACACAGAGATAAGGAAAAGAAACGGAAAAGTCACAAAGGACAGCATGATGACCCAGAATACCTAGAGCGAAAGCGATTAAAGAAAGAGAAAAAACGCAAAGAAAAAGAATTGGCAAAACTACAAAGTGGTGAAGCAAAAAGATCCTCCGTAGACTTGTCATGTAAGAAAGAACAACCTGTAGTGGACGAAGTGAAGCAGCTGAAATCTGTTGAACCCAGCAGTTATAATTCTATACCAGACATTAGAACTATTGATACCAAACCCAGGGCATCCGAAGGCACATCCGGTAATTCTATACCAGACATTAAAACTATTGATACCAAACCCAGGGCATCCGAAGGCACATCTGGTGCGCCCAAAATTCGAATTAAAATTAAAAATCGAATGCTTAACAAGTCATAG 3720 0.4169 MRRARCWFPCIDDNLQQCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFELLPDHQFGLISHLCLAPNLAKMRHTVDFFHNAFSCYKDYLSVDFPFDSYKQVFVEPEMAVSSLSLGASMSVFSSQILYDEKVIDQTIDTRVKLAYALARQWFGVYITPESPNDEWLLEGLAGFLADFFIKKHLGNNEARYQRYKANCSVCKVDNGGTTVLSCSASCKDLYGTQCIGLYGKIRAWKSVAVVQMLEKQMGPESFRRILQTIVTRAQDKVRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPNLRMGFSYNKRKNVVELAVLRGCTALQTSSTAVLDINPDTENRDADSGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSRLAARRFQKSKKGLKHDGSDDNGDMPSMDIRSSTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQQSFSVVNALNSFLTDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDSDIGLPKPNDFHDFAEYFVLEAIPHAVATIRAADKKSPREAIDFVLQLLKYNDNTGNPYSDVFWLAALVQSIGEFEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTVSCIRTLAQIAIKLSGFIPLDRIYELLKPFRDLKAIWQVRIEANRALLDLEFHCKGIDAALLLFTKYVEEEPSLRGKLKLATHVMRLCQMRDDLISNDEITSQTLVSLLNLLEGRMSFNNVFLRHYLFCILQILAKRPPTLHGIPRESRTLHMSLTEAGNYQRNLFVLDSENKPLELPNSTPNLTQDLIVTEGFRDALDEAPKDQVFEASMDQTFEAPKEVHVEALEEAPQEAPKEDLTGFPPEAPIEAPNEIYKEADTVSNSHERKRLIKIKVKQSSATSRSRADTDNQMVERSLGGRNDIDHGASSSVSVSVDAPQRNFAETVSIGNHNIEEVNSWHDPGSRMTASIGSAKILGDELVKELQCTADSSVVYSQPRPEDPSPSSIIQDNKPSSIIQDNNIDADARRFASLQTLSVARLDHDGESFGKEISARRKEKHRDKEKKRKSHKGQHDDPEYLERKRLKKEKKRKEKELAKLQSGEAKRSSVDLSCKKEQPVVDEVKQLKSVEPSSYNSIPDIRTIDTKPRASEGTSGNSIPDIKTIDTKPRASEGTSGAPKIRIKIKNRMLNKS 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01730 1239 Pfam Peptidase family M1 domain 101 297 IPR014782 GO:0008237|GO:0008270
Vivi1g01730 1239 Coils Coil 1127 1152 - -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 425 447 - -
Vivi1g01730 1239 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 2 1139 IPR037813 GO:0005669
Vivi1g01730 1239 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 87 333 - -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 941 982 - -
Vivi1g01730 1239 Gene3D - 471 730 IPR011989 -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 1094 1239 - -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 1155 1170 - -
Vivi1g01730 1239 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 4 71 IPR042097 -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 1040 1068 - -
Vivi1g01730 1239 SUPERFAMILY ARM repeat 271 806 IPR016024 -
Vivi1g01730 1239 FunFam Transcription initiation factor TFIID subunit 78 329 - -
Vivi1g01730 1239 Gene3D Neutral Protease Domain 2 82 329 IPR027268 -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 1194 1208 - -
Vivi1g01730 1239 Gene3D tricorn interacting facor f3 domain 1 70 IPR042097 -
Vivi1g01730 1239 MobiDBLite consensus disorder prediction 1116 1131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01730 Vivi-Chr1 37454142 37473981 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01730 K03128 - gmx:100792795 1995.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01730 1 37454142 37473981 Vivi1g01730 1 37454142 37473981 ECH