Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01718 ATGGAAGCTGAGAACAGTCTTCACAAGCAAGCTACTGAAGTCTTTAACGGAAGAGGCGAGAGCTCGCGTTCCAATGCCAGCGAGGCACAGCCTAATGCGAAAAGGGTCAGGGTGGAGAAGGAACTAACTTTTAAGGACATGTATGAGAACAAAGAGTTGTTCGAGGAGGATGACGAGGAGGACACTGATTGGGAGCCGTGTCCCGTGGAGAAGTGTGTTGAAGTCGTCAAGTGGTTCTGTAGAAACTGTACTATGGATAACCTAGACATTAATATCTGCTGCGAAGTATGTGGGGAGCATAAAGATTCTAAAATCCTAACCCTTGGGCATTTTGCATCACCCTTTGCACAAGATGGAAATCTGAATGAAATCCAGCCAAGTATAAAAGTAATGAGAGATCTTGACTCCCAGGAATCAGCTGCAAACAGTTCTACGGCAATTGGCTTTGACGAAAGAATGTTGTTACATTCAGAAGTTGAAAAGAAATCGCATCCACACCCTGAAAGGCCAGATCGACTTCGAGCAATTGTTGCTAGTCTTACGAGAGCTGGTATATTTCCAGGAAGATGCTATCCAATTCCTGCTAGAGAAATCACTCAAGAAGAACTTATGATGGTTCATTCTTCGGAGCATATTGAATCTGTGGAAGTTACAAGCAAGTTAATGTCTAGTTATTTCACTTCCGACACATACGCGAACAAGCATTCAGCATGTGCTGCTAGGCTTGCAGCTGGGTTATGTGCTGATCTGGCATCGGCAATTGTTTCTGGGCGTGTCAGAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCTGGTGTAAAAGATGTGATGGGGTTTTGTCTACACAATAATGCTGCAGTGGCAGCATTGGCAGCTCAGGCTGCAGGGGCTAGGAAAGTTCTAATTTTAGATTGGGATGTTCATCACGGAAATGGCACACAGGAAATATTTGAGAAAAAAAAATCGGTCTTGTATATTTCATTGCATAGACATGAGGACGGAACATTTTATCCTGGTACTGGAGGTGCTCATGAGGTTGGTTACATGGGTGCAGAAGGATACTGTGTGAATATTCCATGGAGTCGAGGTGGTGTTAGTGATAATGATTACAATTTTGCATTTCAGCAAGTTGTACTTCCTATAGCTTCTGAATTTGCTCCCGATTTTACCATAATATCAGCGGGATTTGATGCTGCCAGAGGTGATCCCCTAGGAGGTTGTGATATTACTCCCTCTGGCTATGCACAGATGACACACATGTTGAATGCCCTATCTGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGCTATAATCTCCGTTCTATATCATCTTCCGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGTCATGTACCCGAACTGGAAAACAGTTTCCCTACCAAATCTGGCCTGCAGACTGTTTTCGAAGTCCTCGACGTTCAGAATAATTTTTGGCCTTCCTTGAAACCTATCTTTGAAAATGTGATGTCACTTTGGGAAATGCGCTGTCTTGGAAAAAAAGTTGTAGGCAAACAGACAAAAAAGAGACGCCGAATTGTGGTACCAAAATGGTGGAGGTGGGGTCGTAGAAGTTTCTTATTCCAAATGCTGAATGGTCATCTCCGTGTAAAATCAAAACGACTTTGTTGA 1659 0.434 MEAENSLHKQATEVFNGRGESSRSNASEAQPNAKRVRVEKELTFKDMYENKELFEEDDEEDTDWEPCPVEKCVEVVKWFCRNCTMDNLDINICCEVCGEHKDSKILTLGHFASPFAQDGNLNEIQPSIKVMRDLDSQESAANSSTAIGFDERMLLHSEVEKKSHPHPERPDRLRAIVASLTRAGIFPGRCYPIPAREITQEELMMVHSSEHIESVEVTSKLMSSYFTSDTYANKHSACAARLAAGLCADLASAIVSGRVRNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEKKKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVNIPWSRGGVSDNDYNFAFQQVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVILEGGYNLRSISSSATAVIKVLLGESHVPELENSFPTKSGLQTVFEVLDVQNNFWPSLKPIFENVMSLWEMRCLGKKVVGKQTKKRRRIVVPKWWRWGRRSFLFQMLNGHLRVKSKRLC 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01718 552 Gene3D Histone deacetylase domain 138 507 IPR037138 -
Vivi1g01718 552 MobiDBLite consensus disorder prediction 1 37 - -
Vivi1g01718 552 PRINTS Histone deacetylase superfamily signature 268 291 IPR000286 -
Vivi1g01718 552 PRINTS Histone deacetylase superfamily signature 301 316 IPR000286 -
Vivi1g01718 552 PRINTS Histone deacetylase superfamily signature 389 399 IPR000286 -
Vivi1g01718 552 FunFam Histone deacetylase 15 138 510 - -
Vivi1g01718 552 SUPERFAMILY Arginase/deacetylase 142 488 IPR023696 -
Vivi1g01718 552 PANTHER HISTONE DEACETYLASE 9-RELATED 54 494 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Vivi1g01718 552 Pfam Histone deacetylase domain 166 454 IPR023801 -
Vivi1g01718 552 ProSitePatterns Zinc finger RanBP2-type signature. 78 97 IPR001876 -
Vivi1g01718 552 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01718 Vivi-Chr1 37133185 37153037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01718 - - psat:127073641 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01718 1 37133185 37153037 Vivi1g01718 1 37133185 37153037 ECH