Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01524 ATGAATTATTGTGCCACCAAAAGTGTTGTCAAGAGAAAAGGTAAAGAAACTGATGAAACGCTGTCGTTCACAAACAATAACAATAACAAGATGTTGTCGCATGATCAACATGATCGAAAAGAAAAACGGTTTGGTCTTGTGTCGTTTTGGGAGCTTCCTAATTATATGAAGGATAATGAATATATTTTGCGGTATTATAGAGCTAATTGGCCTCTTAAGGAAGCTTTCTTCAGTCTCTTTCTTTGGCATAACGAAACTTTGAATGTTTGGACACATTTACTTGGTTTTATTCTGTTTCTTGGATTAACCTTGGCCAATTTGATGAAGCCTCGTGTCGTTGATCTCTTACAACAATTTACAAGATCTCTCTCTTCAGGTGCTGAAAAAAATGTCTCAGATACCATCAAAGATTTCCTGGGCGCGGCGTTACTGTTTGATCTAAAACATCAAGTACCATTGAAAATGGAAGTTGAAGCATTAGAATTTGTTATAGCAAGATGGCCATTCTTTGTTTTCCTAGGTGGATCTATGTTCTGTCTCCTCTCAAGCAGTATTTGTCACCTCTTTTCATGTCACTCCCATGATTTAAACCTGTTTCTATTAAGACTCGACTACTGCGGAATCGCTGTCATGATCATAACTTCATTTTTCCCTCAGATTTACTATGTTTTCCTATGCCAACCTCAATGGCAATTCCTCTACTTAGCTGGTATAACTGCCATGGGACTATTCACCATAGTGACATTGCTTTCTCCAACGCTTTCTACGGGAAAACATCGCGCGTTTCGAGCTATGTTGTTCTGCTCGATGGGACTTTTCGGTATTGTGCCTGCAGTTCATGCTTGTATTGTGAATTGGGCGAATCCTCGGCGCAATATTACACTAGCGTATGAATGTGCCATGGCATTTTCTTACCTGATTGGAACAATGTTCTATGTGACGCGGATACCGGAACGATGGAAGCCTGGTTGGTTTGATTTAGCAGGACACAGTCATCAAATATTTCATGTTTTAGTTGTGGCTGGTGCTTTGGCACATTATGCAGCTACTCTTAAATTGCTTGAATGGCGTGACACTTTTGGGTGTGACATGGTTTAA 1098 0.398 MNYCATKSVVKRKGKETDETLSFTNNNNNKMLSHDQHDRKEKRFGLVSFWELPNYMKDNEYILRYYRANWPLKEAFFSLFLWHNETLNVWTHLLGFILFLGLTLANLMKPRVVDLLQQFTRSLSSGAEKNVSDTIKDFLGAALLFDLKHQVPLKMEVEALEFVIARWPFFVFLGGSMFCLLSSSICHLFSCHSHDLNLFLLRLDYCGIAVMIITSFFPQIYYVFLCQPQWQFLYLAGITAMGLFTIVTLLSPTLSTGKHRAFRAMLFCSMGLFGIVPAVHACIVNWANPRRNITLAYECAMAFSYLIGTMFYVTRIPERWKPGWFDLAGHSHQIFHVLVVAGALAHYAATLKLLEWRDTFGCDMV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01524 365 Pfam Haemolysin-III related 80 347 IPR004254 GO:0016020
Vivi1g01524 365 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 28 358 IPR004254 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01524 Vivi-Chr1 31862790 31865132 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01524 K07297 - gmx:100816825 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01524 1 31862790 31865132 Vivi1g01524 1 31862790 31865132 ECH
Vivi1g01524 1 31862790 31865132 Vivi4g01461 4 54482396 54486817 PCT