Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01172 ATGTCTGGGGTTTGGGTATTTAAGAACGGGGTGGTGAGGCTAGTAGAGAACCCTGGAGGTGAGGGGGGTGAGAATAGTGGAAGGAGAAAAGTGCTTGTTCACACCCCAACCAACGAAGTTATCACTTCCTATTCTATGTTGGAACGAAAGCTATCCTCTCTTGGTTGGGAACGCTACTATGATGACCCTGATCATCTGCTTCAGTTCCACAAACGCTCCACCGTGTACCTTATCTCTCTTCCAAAGGATTTCAACAAGCTCAAGCCCATGCACATGTATGACATTGTCGTTAAGAACAAGAACTATTTCCATGTTAGGGACATGTAG 327 0.4587 MSGVWVFKNGVVRLVENPGGEGGENSGRRKVLVHTPTNEVITSYSMLERKLSSLGWERYYDDPDHLLQFHKRSTVYLISLPKDFNKLKPMHMYDIVVKNKNYFHVRDM 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01172 108 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1 1 108 IPR039274 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01172 Vivi-Chr1 24497671 24498387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01172 - - egr:104426130 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01172 1 24497671 24498387 Vivi4g02686 4 128405723 128406349 PCT