Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01053 ATGGATACGAAACAGGATATTGATTATTTGCCAAAGAACGCGGCGAACTACACCGCTTTAACGCCGTTATGGTTCTTACAACGCGCAGCTCAAGTTCACCCAACCAGAAAATCTGTTATTCACGGATCCCGTCATTACACGTGGCACCAGACTTACCAACGTTGCCGCCGATTCGCCTCCGCTCTCTCCAAACACTCCATCGGCCCCGGACACACCGTAGCTGTTATTGCGCCGAATATTCCGGCTCTCTATGAAGCTCATTTTGGGATTCCGATGGCGGGGGCGGTGTTAAATCCGGTGAATATAAGGCTAAATGCGGCAACTATTGCTTTTCTTCTTGGTCATTGTACTGCGTCGGTTGTAATTGTGGATCAAGAGTTTTTTAGGTTGGCGGAAGAAGCTTTGAAAATATGGTCTGAGAAATCTGAGACATTCAAGTCTCCGATTTTGATTGTGATTGGAGATGAACACTGCGATCCTGAGTCGCTTAGATATGCTTTGAGCAAAGGAGTTGTTGAGTATGAGGATTTTCTTCAAAGTGGTGACCCGGAATATGATTGGAAGCCACCGGAGGATGAGTGGCAGAGTATTGCTTTGGGTTACACGTCTGGGACGACGGCTAGTCCTAAAGGTGTGGTTTTGCATCACCGTGGAGCGTATCTGATGGCTCTTAGTTGTGCACTTATTTGGGAAATGAATGACGGAGCTATATATCTTTGGACTCTACCTATGTTTCATTGTAATGGCTGGTGCTACACTTGGACACTTCCAGCTATATTTGGCACAAACATATGCCTTCGTCAGGTGTCTGCAAAGGCAGTATATGAAGCCATTGCCAAGTACAAAGTGACTCATTTTTGTGCAGCACCAGTGGTGCTTAACTCAATAGTTAATGCTCCTCCTGAGGAAACCATACTTCCTCTACCTCATGTTGTACGTGTGAATACTGCCGGTGCTGCTCCTCCTCCTTCTGTTCTTGCCGGCATGCATAAAATAGGATTTCGTGTCACGCACACTTATGGTCTTTCAGAAACCTTTGGCCCGTCCGTCTATTGTGCCTGGAAACCTGAGTGGGACTCACTTCCCCCGGAATCCCAAGCCCGGCTCCATGCAAGACAAGGGGTTCGGTTCCTTGCCTTGGAAGGCCTGGATGTCGTCAACACAAAAACCACGCAACCTGTTCCTGCAGATGGTAAAACTGTTGGTGAGATCGTGATGCGTGGTAATGCCGTGATGAAAGGCTACTTAAAGAATCCTAAAGCTAATGAAGAGAGCTTTGCAAATGGATGGTATCATTCCGGTGATCTTGCTGTAAAGCACCCAGATGGATATATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCGGGAGCTGAAAATATCAGCAGTGTAGAGGTAGAGAATGCTCTCTACTCACATCCTGCTATACTGGAGACATCAGTGGTTGCAAGGCCAGATGAGAAATGGGGCGAGTCTCCATGTGCGTTTGTCACGTTGAAACCTGGAGTGGATACTAGTAACGAGCAGCGTCTAATTGAGGATATAATGAAGTTCTCCAGATCAAAGTTACCTGCTTATTGGATCCCAAAATCGGTTGTATTTGGACCGTTACCTAAGACAGCTACCGGGAAGGTTCAGAAGCATCTGCTGAGGGCCAAAGCAAAGGAGATGGGGCCTATCAAGAATAAGATTAGCAAGTTGTAA 1707 0.4646 MDTKQDIDYLPKNAANYTALTPLWFLQRAAQVHPTRKSVIHGSRHYTWHQTYQRCRRFASALSKHSIGPGHTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNAATIAFLLGHCTASVVIVDQEFFRLAEEALKIWSEKSETFKSPILIVIGDEHCDPESLRYALSKGVVEYEDFLQSGDPEYDWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSCALIWEMNDGAIYLWTLPMFHCNGWCYTWTLPAIFGTNICLRQVSAKAVYEAIAKYKVTHFCAAPVVLNSIVNAPPEETILPLPHVVRVNTAGAAPPPSVLAGMHKIGFRVTHTYGLSETFGPSVYCAWKPEWDSLPPESQARLHARQGVRFLALEGLDVVNTKTTQPVPADGKTVGEIVMRGNAVMKGYLKNPKANEESFANGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDTSNEQRLIEDIMKFSRSKLPAYWIPKSVVFGPLPKTATGKVQKHLLRAKAKEMGPIKNKISKL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01053 568 Pfam AMP-binding enzyme C-terminal domain 466 545 IPR025110 -
Vivi1g01053 568 Gene3D - 453 560 IPR045851 -
Vivi1g01053 568 PANTHER ACYL-ACTIVATING ENZYME 11 562 - -
Vivi1g01053 568 FunFam Long-chain-fatty-acid--CoA ligase FadD 8 452 - -
Vivi1g01053 568 Gene3D - 6 452 IPR042099 -
Vivi1g01053 568 FunFam 2,3-dihydroxybenzoate-AMP ligase 452 559 - -
Vivi1g01053 568 Pfam AMP-binding enzyme 26 457 IPR000873 -
Vivi1g01053 568 CDD ttLC_FACS_AEE21_like 17 553 - -
Vivi1g01053 568 SUPERFAMILY Acetyl-CoA synthetase-like 13 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01053 Vivi-Chr1 22395701 22398759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01053 5 561 Miscellaneous Gene Families AT3G16910 75.448 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01053 K01913 - gmx:100808187 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01053 1 22395701 22398759 Vivi1g01053 1 22395701 22398759 ECH