Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01034 ATGGAAGCCAATACAGAGATAGTTGAAGATTCCCAAATGGACGTAGATCAACCCCGAGACGATAAATCGAAGGAGGAGGAAGATCCTTTTCTCAATTTCGTCGATCTAGCAAGATCGGAGCTATTATCGCTCGAAGACGATTCAAATCGAGACGATATCGATTCATCTGGATATGGCTGGAGCTGGATCGTATCTCACATTCTCAAAACTTGTATTGCTTATTCAAGCGGTGTCACTCCCGCGATTTTGCTCTCTGAACTCTCTCAGGCATGGAGTGAGCAACGCAGGGTTGCTGTGCCGAAGAAGAGACTGGAATTGATTAACAGTCTTAAGAAAAATAATAGAAGGACGAAGCTTCCAAATACTGTTACGATTGACTCCATTTACGAGAAAAAATTCATTGCTTTGAACAGTGTTTTGGAAGCTGTTATTATCGATGCTTATGTACTTCCAGGCACAAACATCCACATGCTTACATTAGGGGATTATTGGAGCTCTAATATCATAGATCTCTACCTTCACCGTAGATTCTATGACTTGGCAGGCCTGCCAAGTGGAATTCTGAAGAAAGGGAGGGAGGTTTTCCTCACAGGCTGCTACCTCCGAACTACCACCGAAAGTTCTGGTCATCCACGTCTTTTGCCAACAGAATATCTCGTGATTCTATTGGATGAGAATCAGGATGATGATGCAATGCTGCTAGGAGCTCAGTTTTGTTCAGACTCCTTCTCTTCAATTTCGCTGGAGGCAGTAAACAGAGGGGCTTCTTATTCACTTTATGCTAGGATTGACAACATTGAATCTGCGGAAATTCGAGGGAAGTTTGGGACCTCACAAAGAAAGCAAATTACTCTTGTTGATGGTGATGGTGTCAAATTAAATTTCTTCTTGTGGAGCGAGCAGGCTCTCCTTGCCAATCTTTTCAGAGTAGGAAGCATGCTTGCCCTGGACAAACCTTACATTGCCAGTTCTGTAGAGTGTGATATTCAAACAAGCGGGGAATTTTGCCTTGAATATGGAAGTGCAACACAATTATATTTGGTGCCTTATATTCAACATGAGGAACAGGTGTGCTTAACTTTGACACCAAACCGCCATCAAGGTTCAAGGCAAAATGGTTCGTATAATCCCACTCAGGGTCTCAAGGTTTCTCAAGTGAGCTTGCCTTGTGATTCTCAGGGTACCATAGATTTCAGCAATTACCCTTTTCGGTCATTTGTGACCGACCTTCGTGACAAGATGACTGGCATCAGCCTCTATGGTGTTGTTACAGAAATTAGCAAAGAAGATAATACCCAGAAAACTGTTTTTTCTTTAAGAATCACAGATACTAGCGGAGAAATCAGGGTGAAGCTTCATTTTACCAGACTTTGGTCATTGGGAAGAGTGAGTCTCGGTCACACGGTATTTATATCTGGCTTGACATGCACGGCCTTGAAACGTCAAAAACGTCTGGAGTTATCATGGTTTGAGGATGGTACCGGAGCTTCTTTCATCAATCTCAGTTGTTTACCAGCATTGATCAACTCATCTTGCCTTTATAAAGTATTCCAACTCTCTGATATTTCTAACCAGACTTTCTTCGCCCAAGTATGCCGAGTCTGGCTTGTTCCGAATCAATATTATTATGTGAATACAAGATTTTCGCATTCTCTCTGCGGTCACTTTGTCGATGAGAAAACCATGGAATGCAGTTTCTGTCATATAATTGCTGATGCAGAGGCTGTACGCACTTTCCATTTGAAAATTACCCTTGCAGATAAGAGCGCGAAAGTTTTAGCATGGTGCACTGGTCAAACTGCCATGGATTTGTTGCAGATATCTCCCGAGGAATTTTGTGACCTTCCTGAGGAAGAACAACTGATGTATCCCTCGTCGTTAGAAAATGAAAAGTTTATGGTTGCATTGGTAAATTGTAAGCGGGAAGGCTGTGTGACATATGACCTTTTGCCGGACAATTCAGTTTCGTGGGAAATCACTCGCGCATACAAGTATGAATAG 2001 0.4248 MEANTEIVEDSQMDVDQPRDDKSKEEEDPFLNFVDLARSELLSLEDDSNRDDIDSSGYGWSWIVSHILKTCIAYSSGVTPAILLSELSQAWSEQRRVAVPKKRLELINSLKKNNRRTKLPNTVTIDSIYEKKFIALNSVLEAVIIDAYVLPGTNIHMLTLGDYWSSNIIDLYLHRRFYDLAGLPSGILKKGREVFLTGCYLRTTTESSGHPRLLPTEYLVILLDENQDDDAMLLGAQFCSDSFSSISLEAVNRGASYSLYARIDNIESAEIRGKFGTSQRKQITLVDGDGVKLNFFLWSEQALLANLFRVGSMLALDKPYIASSVECDIQTSGEFCLEYGSATQLYLVPYIQHEEQVCLTLTPNRHQGSRQNGSYNPTQGLKVSQVSLPCDSQGTIDFSNYPFRSFVTDLRDKMTGISLYGVVTEISKEDNTQKTVFSLRITDTSGEIRVKLHFTRLWSLGRVSLGHTVFISGLTCTALKRQKRLELSWFEDGTGASFINLSCLPALINSSCLYKVFQLSDISNQTFFAQVCRVWLVPNQYYYVNTRFSHSLCGHFVDEKTMECSFCHIIADAEAVRTFHLKITLADKSAKVLAWCTGQTAMDLLQISPEEFCDLPEEEQLMYPSSLENEKFMVALVNCKREGCVTYDLLPDNSVSWEITRAYKYE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01034 666 Gene3D - 406 494 IPR012340 -
Vivi1g01034 666 Pfam Cell division control protein 24, OB domain 1 30 154 IPR035201 -
Vivi1g01034 666 CDD RPA2_OBF_family 418 491 - -
Vivi1g01034 666 PANTHER NUCLEIC ACID-BINDING PROTEINS SUPERFAMILY 29 666 - -
Vivi1g01034 666 SUPERFAMILY Nucleic acid-binding proteins 514 635 IPR012340 -
Vivi1g01034 666 MobiDBLite consensus disorder prediction 1 28 - -
Vivi1g01034 666 Pfam Cell division control protein 24, OB domain 2 159 288 IPR035200 -
Vivi1g01034 666 MobiDBLite consensus disorder prediction 12 28 - -
Vivi1g01034 666 SUPERFAMILY Nucleic acid-binding proteins 407 488 IPR012340 -
Vivi1g01034 666 Pfam Cell division control protein 24, OB domain 3 409 627 IPR035203 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01034 Vivi-Chr1 22062787 22078249 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01034 - - gmx:100807658 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01034 1 22062787 22078249 Vivi1g01034 1 22062787 22078249 ECH