Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01029 ATGAACTCAATCCCTTCTCCTCCATCTTCTTCTTCTTCTCCAAGTTTCACACTCTTCACTCAGTCCAAAAACCCTAACTATATCTTCAAGTTCAACCTCAAAGTACCCATTTTACCCTTCCATTCTTCATCTTCTCATCTTATCTCACCATGTTGCACTCTCAAGGACTCAATGTCAGTGTTGGACAAAAATGCCCCTGCATCCCAACAGAGTTCCCTCAATTATGTTCCACCCAAAGACTCAAACATTGATGAAGCCCTTGTGGTTCGCAGACCGGTGAAGGAGTTTTCCGGCGATAACTCCGATGAGGTGGAGGAGGAAAAGGAGAATAAAATAGAGAAAGATGAACCTAAAGCTTCTTCTATGGATGCTGGTCTCGCGAAATTTGCGAAGAAGATGCCGATATTTGAACCTGGTAGGGTCGAATCAGACTCGAAAGAGAAGCTTTTGACTGTGAATTTGGACTTGGCGTTATATAATGCAAAGGTTTTGGCTAGAAACTTTCGTTATGAAGAAGCAGAGTCAATTCTTATGAAGTGTATATCCTATTGGCCTGAAGATGGTAGACCTTATGTGGCACTTGGGAAAATTTTGAGCAAGCAATCTAAAATGGGTCAAGCTAGAGAGATTTATGAGAAGGGTTGCCAAGCTACTCAGGGTGAAAATGCCTTCATTTGGCAGTGTTGGGCTGTTCTTGAAACGAAAATGGGAAATGTCAGAAGAGCAAGAGAGCTTTTCGATGCTGCAACGGTTGCTGATAAGAAGCATGTTGCTGCTTGGCATGGTTGGGCAGTGCTAGAGTTAAAGCAGGGAAATATAACGAAGGCAAGGAATCTGCTTTCGAAAGGTCTTCAATATTGTGGACAGAATGAGTACATATACCAAACACTTGCATTGCTTGAAGCTAAGGCAAATCGACATCAGCAGGCTCGATATTTATTCAATCAGGCAACCAAGTGTAATCCTAATAGCTGTGCTAGTTGGCTCGCTTGGGCACAAATGGAGGTGGAACAAGAAAATTATCGTACTGCAAGGAGATTGTTTGAGAATGCAGTGCAGGCAAGTCCTAAAAATAGGTTTGCTTGGCATGTATGGGGCCTTTTTGAAGCTAACTTGGGAAAGATTGATAAGGGAAAAAAACTTCTAAAGATAGGCCATGCTCTAAATCCGAGGGATGCTGTTCTCCTTCAGTCTCTTGCATTGATAGAATACAAACACTCAAGTGCAAATCGTGCTCGTGTTTTGTTCAGGAGAGCATCTGAATTAGATCCGAAGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGAAACTTGAACACAGCTAGAGAATTATACAGAAAAGCTTTATCAATTGATCAAAACAGTGAAAGTGCGGCCAGGTGCCTCCAGGCATGGGGTGTTCTGGAGCAGAGGGTTGGCAATCTTTCATCTGCTCGTAGATTATTTAGAACCTCGTTGACTATAAATTCTCATAGTTATGTGACATGGATGACTTGGGCATCACTGGAGGAAGATCAAGGAAATCCTGTGCGCGCCGAAGAGATTCGTAACCTTTATTTCCAGCAGCGCACGGAAGTTGTAGATGATGCTTCGTGGGTTATGGGATTCTTAGATATTTTAGACCCTGCCATTGACAGTTTGAGGAAGCTCTTGAAGATGAACCCAGATTCATTCAGAGTGTCACCAGATTCCATGAAAAATATTACCGGAACAAAGAAAAACATGGTTGATTATTCTAGTGAGGATGATGATAGTGAGGAGGGTGATGATAGTGAGGAGGACGATGAAGGTGAATTTGATTTAGATCGTTTCATTATGGAAAGGTTATCCTTAGATGTGTCAAAACTTGAAGTTCAATTGGAAACACCGAAAGTTCAGTCTCCGAACAAAATTTTGTCTCCAAGAAGGATATGGAGACCAGATAAAAGTGTAAGTTCAAAATACCGGTAA 1965 0.4204 MNSIPSPPSSSSSPSFTLFTQSKNPNYIFKFNLKVPILPFHSSSSHLISPCCTLKDSMSVLDKNAPASQQSSLNYVPPKDSNIDEALVVRRPVKEFSGDNSDEVEEEKENKIEKDEPKASSMDAGLAKFAKKMPIFEPGRVESDSKEKLLTVNLDLALYNAKVLARNFRYEEAESILMKCISYWPEDGRPYVALGKILSKQSKMGQAREIYEKGCQATQGENAFIWQCWAVLETKMGNVRRARELFDAATVADKKHVAAWHGWAVLELKQGNITKARNLLSKGLQYCGQNEYIYQTLALLEAKANRHQQARYLFNQATKCNPNSCASWLAWAQMEVEQENYRTARRLFENAVQASPKNRFAWHVWGLFEANLGKIDKGKKLLKIGHALNPRDAVLLQSLALIEYKHSSANRARVLFRRASELDPKHQPVWFAWGWMEWKEGNLNTARELYRKALSIDQNSESAARCLQAWGVLEQRVGNLSSARRLFRTSLTINSHSYVTWMTWASLEEDQGNPVRAEEIRNLYFQQRTEVVDDASWVMGFLDILDPAIDSLRKLLKMNPDSFRVSPDSMKNITGTKKNMVDYSSEDDDSEEGDDSEEDDEGEFDLDRFIMERLSLDVSKLEVQLETPKVQSPNKILSPRRIWRPDKSVSSKYR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01029 654 MobiDBLite consensus disorder prediction 567 605 - -
Vivi1g01029 654 MobiDBLite consensus disorder prediction 96 119 - -
Vivi1g01029 654 Gene3D Tetratricopeptide repeat domain 147 396 IPR011990 GO:0005515
Vivi1g01029 654 Gene3D Tetratricopeptide repeat domain 397 573 IPR011990 GO:0005515
Vivi1g01029 654 MobiDBLite consensus disorder prediction 640 654 - -
Vivi1g01029 654 ProSiteProfiles TPR repeat profile. 427 460 IPR019734 GO:0005515
Vivi1g01029 654 SUPERFAMILY TPR-like 127 403 IPR011990 GO:0005515
Vivi1g01029 654 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 29 647 IPR044624 GO:0003729|GO:0006397
Vivi1g01029 654 SMART tpr_5 188 221 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 223 256 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 291 324 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 393 426 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 257 290 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 464 497 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 325 358 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 427 460 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 359 392 IPR019734 GO:0005515
Vivi1g01029 654 SMART tpr_5 154 187 IPR019734 GO:0005515
Vivi1g01029 654 MobiDBLite consensus disorder prediction 626 654 - -
Vivi1g01029 654 MobiDBLite consensus disorder prediction 585 605 - -
Vivi1g01029 654 FunFam High chlorophyll fluorescent 107 145 354 - -
Vivi1g01029 654 Pfam Tetratricopeptide repeat 429 459 IPR019734 GO:0005515
Vivi1g01029 654 SMART hat_new_1 407 439 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 202 235 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 441 476 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 305 337 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 339 371 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 271 303 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 478 510 IPR003107 GO:0006396
Vivi1g01029 654 SMART hat_new_1 237 269 IPR003107 GO:0006396
Vivi1g01029 654 SUPERFAMILY TPR-like 379 563 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01029 - - vun:114175850 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01029 1 21981405 21984989 Vivi1g01029 1 21981405 21984989 ECH