Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01014 ATGGCTCAGATTTGGGATGCCGCCAGTCAAGAACGATTTTGCATTATTACGTCGACATCCACACAAGTGCCATTGGTGCTCTCACTGTCTATGATATTAGCCGGAGAACTACCTTTGATAGCATCAGTAGATGGCTCAATGAACTCAAGACTCACTTGCTGCAAGTTAACGAACAAAAGTTCACTTGCTTACAAAATTATACAAAGAAATGATCAGAGTAATTTTATCAGCGTTGATCTCACGGCGGCGGAGGATGTTTTCAAGGGTGACGTTAAGGATCCGGAGAGTGATCCCGTCGTGCAAATGGAACGGTGCCGTAAACCTATAATCGGTGCTATTAAAGGATTTGCAGTTACTGCTGGATTCGAGATTGCGCTTGCTTGTGATATTTTGGTTGCTGCTAAGGGAGCTAAATTCATGGACACACATGCTAGATTTGGGATATTCCCATCGTGGGGTTTGTCTCAGAAGCTTTCACGCATTGTAGGAGTAAATAAAGCTCGGGAGGTTTCGCTTACAGCCACGCCTTTGACAGCAGAGGTAGCTGAAAAGTTGGGTTTGGTGAACCATGTTGTTGAGGAGGGTGAATTGATGAAGAAAAGCAAAGAAATTGCGGAAGCTATTGTGAAAAATAACCAAGACTTGGTGTTGAAGTACAAGTCAGTGATAAATGATGGCATTAAGCTTGATCTTGGCCATGCTCTTTCTCTTGAAAAGGTTAGTGCTATAGCATTTGTGTGTCTTAAATTGTATAATATGGATTCTGTTATGTTATATTATGGTATAGGTATAGTTTGA 798 0.416 MAQIWDAASQERFCIITSTSTQVPLVLSLSMILAGELPLIASVDGSMNSRLTCCKLTNKSSLAYKIIQRNDQSNFISVDLTAAEDVFKGDVKDPESDPVVQMERCRKPIIGAIKGFAVTAGFEIALACDILVAAKGAKFMDTHARFGIFPSWGLSQKLSRIVGVNKAREVSLTATPLTAEVAEKLGLVNHVVEEGELMKKSKEIAEAIVKNNQDLVLKYKSVINDGIKLDLGHALSLEKVSAIAFVCLKLYNMDSVMLYYGIGIV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01014 265 Pfam Enoyl-CoA hydratase/isomerase 92 238 IPR001753 -
Vivi1g01014 265 CDD crotonase-like 102 208 - -
Vivi1g01014 265 Gene3D - 57 251 - -
Vivi1g01014 265 PANTHER ENOYL-COA HYDRATASE 74 245 - -
Vivi1g01014 265 SUPERFAMILY ClpP/crotonase 93 240 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01014 Vivi-Chr1 21633804 21636188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01014 100 261 Acyl Lipid Metabolism Gene Families AT1G60550 32.716 3.96e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01014 K01692 - gmx:100170725 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01014 1 21633804 21636188 Vivi1g01014 1 21633804 21636188 ECH