Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00977 ATGACAAATTTGAAGCCTCTAACTCTTTTCTTTTTCCTCCAAGCTATTATTCTCATAACTTCAATACCAACAACTTACTCTAGAAACACTTTCCCATTAAATGATGAAAAACTATCATCACTTATAGAAAACACTTGCAAAAAAACACCAAACTACAATATTTGCATTCAATCTCTCAAACAAAATTCTGGTAGTTCTGTAGCTGATGTAACAGGACTAGCTCAAATAATGGTGAAAGTGATGAAAGCAAAAGCGAATGATGGATTAAATAAGATTCATCAGTTACAAAGGGTGAGAAATGGTGGAGCTAGAAAAGTTTTGAGTTCTTGTGGTGACAAATACAGAGCAATTTTGGTAGCTGATATACCTCAAGCTATTGAAGCATTGGAGAAAGGGGATCCAAAATTTGCAGAAGATGGTGCAAATGATGCTGCAAATGAAGCAAGTTATTGTGAGAGTGAGTTTAATGGAAAATCACCACTTACTATACAGAACAATGCTATGCATGATGTTTCGGTTGTTACAGCAGCTATGGTTAGACAATTACTTTAA 552 0.346 MTNLKPLTLFFFLQAIILITSIPTTYSRNTFPLNDEKLSSLIENTCKKTPNYNICIQSLKQNSGSSVADVTGLAQIMVKVMKAKANDGLNKIHQLQRVRNGGARKVLSSCGDKYRAILVADIPQAIEALEKGDPKFAEDGANDAANEASYCESEFNGKSPLTIQNNAMHDVSVVTAAMVRQLL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00977 183 SMART PMEI_2 37 178 IPR006501 GO:0004857
Vivi1g00977 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 182 IPR035513 -
Vivi1g00977 183 Pfam Plant invertase/pectin methylesterase inhibitor 40 177 IPR006501 GO:0004857
Vivi1g00977 183 FunFam Invertase/pectin methylesterase inhibitor family protein 37 183 - -
Vivi1g00977 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 180 - -
Vivi1g00977 183 NCBIfam pectinesterase inhibitor domain 11 182 IPR006501 GO:0004857
Vivi1g00977 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 183 IPR035513 -
Vivi1g00977 183 CDD CIF_like 39 182 IPR034087 GO:0004857|GO:0043086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00977 Vivi-Chr1 20746819 20747656 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00977 - - gmx:100500640 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00977 1 20746819 20747656 Vivi1g00977 1 20746819 20747656 ECH