Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00972 ATGTTGAAGTCATTGGCATTATTCATTCTCATCTTGTGCACCACTCTTGTTGTAACTCACTCCCGAGTTATTCAAGCAAGCGGTACCAATATTGTACAACAAATTTGTAGTAAGACTCCAAATCCTGCACTATGCATTCAATACCTAAATGCTGATCCAAAAAGCTCCACCTCAGATGTGAAAGGGTTAGCACAAATCATGTTCAATGTACTAAAGAGCAAAGCAAGCATTGCCATAGACAAAATCATTAAGCTTACTATCACTATTCCTCCAAAACAAAAGGAAGCACTTCTGTATTGTAGTATTGATTACACTTCAGTTTTGATTGAAGCTTCTCAAGGAACTCAAGCTTTGCAAAATGGGGACCCATCATTTGCAGTAGATAATGCAAATTATGTTACTTCTGAAGCCAATGGTTGTGAGAATGGCTTTTCTGGAAAATCACCACTCACAGTTGAAAACAACTTAATGCGTGATGCATCTACCATAACATCGGCTATTTGTAAATTATTGCTCTAA 519 0.3719 MLKSLALFILILCTTLVVTHSRVIQASGTNIVQQICSKTPNPALCIQYLNADPKSSTSDVKGLAQIMFNVLKSKASIAIDKIIKLTITIPPKQKEALLYCSIDYTSVLIEASQGTQALQNGDPSFAVDNANYVTSEANGCENGFSGKSPLTVENNLMRDASTITSAICKLLL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00972 172 CDD CIF_like 29 171 IPR034087 GO:0004857|GO:0043086
Vivi1g00972 172 SMART PMEI_2 27 167 IPR006501 GO:0004857
Vivi1g00972 172 NCBIfam pectinesterase inhibitor domain 2 171 IPR006501 GO:0004857
Vivi1g00972 172 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 171 IPR035513 -
Vivi1g00972 172 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 171 - -
Vivi1g00972 172 Pfam Plant invertase/pectin methylesterase inhibitor 31 166 IPR006501 GO:0004857
Vivi1g00972 172 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 172 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00972 Vivi-Chr1 20372520 20373038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00972 - - vvo:131630714 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00972 1 20372520 20373038 Vivi1g00972 1 20372520 20373038 ECH