Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00963 ATGCATATTGTCGCTCCTTTTACTCCCGGTCAGGTTTCGTTCTTGCTCGGGATCATTCCGGTTATTATAGCATGGATTTATTCCGAGATATTGGAGTATCGGAAAAATTCTTTGATGAAATCTAGGCACTCCGAGATAAACTTAGCTGAATTGAGTAGTGATGTTGTTAAAGATGAAGACAGAGCAGTTTTATTGGAAGCAGGATCTCAACAACCAGTATCCCCTACTCCGAAAGCTCGAAGCTTATCTACCTCACCATCAATTATCCGATTCCTCTTGATGGATGAACATTTCCTTATTGAAAACCGTTTGACACTTAGAGCCATGTCTGAATTTGGTCTTCTTTTGGCTTACTACTATTTGTGCGATCGCACGGATTTCTTTAACTCATCAAAAAAGAGTTACAATAGGGATCTATTCATCTTCCTTTATTTTCTCCTCATCATAGTTTCAGCAATAACTTCATTTACAATACATCACGACAAGTCACCATTTTCTGGGAAACCCATACTTTACTTAAATAGGCATCAGACTGAAGAGTGGAAAGGCTGGATGCAGGTATTGTTTTTGATGTACCATTATTTTGCTGCAACTGAAATCTACAATGCAATCCGTTTGTTCATTGCTGCATATGTTTGGATGACTGGGTTTGGAAACTTCTCATATTATTATGTTCGTAAAGATTTTAGCATGGCTAGATTTGCTCAGATGATGTGGAGGCTTAATTTCTTGGTATTGTTCTGTTGTGTTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCTATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTCGGTATTCTCCACAAGTACAATGAGATTGGGTTAGTCATTGCTGCAAAATTTTTTGCTTGCTTCTTGATTGTTATCTTAGTATGGGAGATACCCGGAGTCTTTGAATGGGTTTGGAGTCCGTTTACTTTCATGCTCGGTTATACTGATCCTGATCCATCTAAATCACAATTTCCCCGCTTGCATGAATGGCATTTTCGCTCAGGGCTTGATCGCTATATATGGATAATTGGAATGATATATGCTTACTATCATCCAACTGTTGAACGATGGATGGAGAAATTGGAGGAAACTGAAATCAAACGCAGAATATCAATCAAAGCTGCTGTCGTGCTAATATCTTTAGTGATGGGTTATTTTTGGTTTGAGCATATATACAAGCTTGACAAGGTCACTTACAACAAATACCATCCTTATACCTCTTGGATTCCCATAACAGTTTACATATGCTTGCGCAATGTTACACAAAGTTTTCGTAGCTTTTCGCTGACTCTTTTTGCATGGCTTGGAAAGGTTACACTGGAGACTTACATCTCCCAGATTCATATCTGGTTAAGATCAGGCATTCCAGATGGTCAACCCAAGTTATTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCCTGCTTACTACTTCCATATATGTTGCAATTTCCTATAGGCTCTTTCAGCTGACCAATACACTGAAAAATGCATTTGTGCCTAGCAAAGATGACAAGCGTCTGCTACACAACATAATTACAGGGACAACAATCTCTGTTGTTTTATATTCATTATCCTTTGCCTTCCTTACGATACCCCAAGTCTTGGTTTGA 1644 0.3881 MHIVAPFTPGQVSFLLGIIPVIIAWIYSEILEYRKNSLMKSRHSEINLAELSSDVVKDEDRAVLLEAGSQQPVSPTPKARSLSTSPSIIRFLLMDEHFLIENRLTLRAMSEFGLLLAYYYLCDRTDFFNSSKKSYNRDLFIFLYFLLIIVSAITSFTIHHDKSPFSGKPILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRLFIAAYVWMTGFGNFSYYYVRKDFSMARFAQMMWRLNFLVLFCCVVLNNSYMLYYICPMHTLFTLMVYGALGILHKYNEIGLVIAAKFFACFLIVILVWEIPGVFEWVWSPFTFMLGYTDPDPSKSQFPRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEETEIKRRISIKAAVVLISLVMGYFWFEHIYKLDKVTYNKYHPYTSWIPITVYICLRNVTQSFRSFSLTLFAWLGKVTLETYISQIHIWLRSGIPDGQPKLLLSLIPDYPMLNFLLTTSIYVAISYRLFQLTNTLKNAFVPSKDDKRLLHNIITGTTISVVLYSLSFAFLTIPQVLV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00963 547 Pfam 10 TM Acyl Transferase domain found in Cas1p 105 517 IPR012419 -
Vivi1g00963 547 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00963 Vivi-Chr1 20217886 20226171 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00963 K03377 - qsa:O6P43_021889 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00963 1 20217886 20226171 Vivi1g00963 1 20217886 20226171 ECH