Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00955 ATGACGGTTGTTTCTCTCTTCCTCACCGCCACCAAACTCGCCGGAGCTTTAGTCACTCTCTCCCTCGCCGCCAATGTCTTCTCCTTCTCTCGTTTTCGCAACAAAAACCTTCGCCCGTTCCGTTCACCTATCGATGAATCCTCCGATACTCTCGCCGATTTCAACATCACCGAAGGGGAAAACGAGTTTTTCTTTGGTCTGGCAACAGCACCGGCACATGTAGAGGACAGGCTTGATGATGCTTGGATTCAGTTTGCGGAACAAGAGAGTATTGCTGGTGCTGAGCAGAAAGTGGATGCTTTAATGGGTTCTGCTACTGCTGATGGTGGTTCTCAAAAAGCTGTTTCAACTTCACAACTTGCTAGTAAGGGTAAGAAGTCTCTTAAGGTCGCTATGGAGGCTATGATCAGAGGATTTGAGAAATACATGGAAGTAGATGAAAATGAAGCAGAAGAAGAACACATTCCTAATGTAGCTGCTTGGCATAATGTTCCACACCCGGAAGAGAGGTTGAGGTTTTGGTCTGATCCTGATACAGAACTAAAATTGGCCAAGAATACTGGCGTTACTGTTTTTCGCATGGGAATTGACTGGTCAAGAATCATGCCCCAGGAGCCAGTAAGCGGCCTTAAAGAATCCGTTAACTATGCTGCATTGGAGCGTTATAAGTGGATCATTAATAGGGTTCGATCATATGGAATGAAGGTGATGCTCACTCTTTTTCATCACTCACTTCCACCATGGGCTGGTGATTATGGAGGTTGGAAGCTGGAAAAGACTGTGGATTATTTCATGGACTTTACAAGGCTTGTTGTTGACAATCTATCAGATTTAGTAGACTATTGGGTAACCTTTAATGAGCCCCATGTTTTCTGTATGCTTACTTATTGTTCTGGCACCTGGCCCGGTGGACATCCTGATATGCTGGAGGCTGCTACTTCCGCGCTTCCTACAGGTGTTTTCCAGCAGGCCATGCATTGGATATCTGTTGCACACTCAAAGGCTTATGATTACATCCACGAACACAGTAATTCATCAAATCCAATAGTCGGTGTTGCACATCACGTGTCATTTATGCGACCCTATGGCCTGTTTGATATTGCTGCTGTTTTACTGGCAAATTCATTGAGTCTCTTCCCATTCATTGATGAAATATCCAAAAAGCAGGACTTCATAGGTGTTAACTATTATGGCCAGGAAGCGATCTCGGGTGCTGGCCTGAAGCTGGTGGAAAATGACGAGTACAGTGAATCTGGGCGTGGAGTATATCCTGATGGCTTATATCGCATGTTGCTTCAGTTCCATGAAAGATACAAGCATCTAAATGTCCCCTTTATTATTGCCGAAAATGGAGTTGCAGATGAGACTGATTTGATCCGCCGGCCGTATCTGTTGGAGCATTTGCTTGCTGTTTATGCAGCTATGATCAAGGGCGTGCCTGTGCTTGGTTACCTCTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTTGCAGTTGACCGGGCAAATAATCTTGCGCGGATCCCTCGTCCTTCTTACCATCTTTTTACAAAAGTTGTGACTACCGGTAAAGTTACAAGCGATGATCGTGATCAAGCTTGGAATGAACTTCAAATAGCTGCTAGAGAGAAGAAAACAAGACCATTTTATCGAGCTGCGGACAAAAGTGGTTTGATGTTAGCAGGTGGACTTGATGAACCCATACAGCGACCTTTTATAGAAAGAGATTGGAGGTTTGGTCATTATGAGATGGATGGTCTTCAGGATAACTTAAACCGTTTCTATAGATTCATTATTCAACCATTACCCCTAAAAAGGAAAAAACAATCTCAAAAGAAGGAATTAGTTCTTCAGCCTCTTTGA 1890 0.4413 MTVVSLFLTATKLAGALVTLSLAANVFSFSRFRNKNLRPFRSPIDESSDTLADFNITEGENEFFFGLATAPAHVEDRLDDAWIQFAEQESIAGAEQKVDALMGSATADGGSQKAVSTSQLASKGKKSLKVAMEAMIRGFEKYMEVDENEAEEEHIPNVAAWHNVPHPEERLRFWSDPDTELKLAKNTGVTVFRMGIDWSRIMPQEPVSGLKESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGDYGGWKLEKTVDYFMDFTRLVVDNLSDLVDYWVTFNEPHVFCMLTYCSGTWPGGHPDMLEAATSALPTGVFQQAMHWISVAHSKAYDYIHEHSNSSNPIVGVAHHVSFMRPYGLFDIAAVLLANSLSLFPFIDEISKKQDFIGVNYYGQEAISGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIIAENGVADETDLIRRPYLLEHLLAVYAAMIKGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFTKVVTTGKVTSDDRDQAWNELQIAAREKKTRPFYRAADKSGLMLAGGLDEPIQRPFIERDWRFGHYEMDGLQDNLNRFYRFIIQPLPLKRKKQSQKKELVLQPL 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00955 629 PANTHER GLYCOSYL HYDROLASE 386 536 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 SUPERFAMILY (Trans)glycosidases 160 536 IPR017853 -
Vivi1g00955 629 Pfam Glycosyl hydrolase family 1 178 362 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 Pfam Glycosyl hydrolase family 1 384 531 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 Gene3D Glycosidases 131 543 - -
Vivi1g00955 629 PRINTS Glycosyl hydrolase family 1 signature 478 495 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 PRINTS Glycosyl hydrolase family 1 signature 502 514 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 PRINTS Glycosyl hydrolase family 1 signature 457 468 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 PRINTS Glycosyl hydrolase family 1 signature 445 453 IPR001360 GO:0004553|GO:0005975
Vivi1g00955 629 PRINTS Glycosyl hydrolase family 1 signature 388 402 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00955 Vivi-Chr1 20104497 20109284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00955 4 611 Glycoside Hydrolase AT3G06510 62.693 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00955 K21362 - gmx:100792401 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00955 1 20104497 20109284 Vivi1g00955 1 20104497 20109284 ECH