Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00938 ATGGCGGAGGTTACTCTCATCGCTCATCTTCTCAACCAAACTCTCAGTCCAGACGCCGCCGCAGTTCGTGCCGCCACTGATGAACTCGATCGCCTATCTCCCACTCCTCACTTCCCTTTCCATCTCCTCTCAATTTCCACTGGAGGAGAAAATCAAGGCCAAAAAATTGCTGCTGCTACTTATCTGAAAAACCACACTCGCCGGAATGTTGATAGTAGCGGCGCCACGCCTTCCAATGTGAGCAAGGAATTCAAGGACCAGCTGATGCAAGCTTTGCTTCAAGTTGAATTTCCCGTTCTCAAGATCTTAGTTGAAGTGTTTCGAGTTGTTGCCGCTGCTGATTTTGTTAAGCAGAGTCTGTGGCCGGATCTTGTGCCTAATCTGCAGTCTGCTATTCAGAATAGCCATCTTATCAACGGTTCAAACTCCACGTGGAATACAATCAATGCACTTATTGTTCTTCATGCGCTTATTAGACCATTTCAGTATTTTTTGAATCCCAAAATTGCGAAGGAGCCCGTACCACCTCAATTAGAGCTTATAGCCAAAGAAATTCTCGTCCCTTTGCTTGCTGTGTTCCATCAATTTGTTGGAAAGGCTATAGCAAGCAATGGCAGTGCAGACTTAGAAACTGAGAAAGCCATCCTCACTATATGCAAATGCCTGCATTTTGCTGTAAAGTCCTACATGCCCTTGACTCTAGTTCCTCTTCTGAATTCATTTAGTCGGGACCTAATGAGCATTTTGAGTTCTCTGAGCTTTGACTGTACAGTCACTCAAGAAGATGTATATTTGACAAGATGGAAGTCTGGAAAAAGAAGTTTGCTTATTTTCTCTTCCCTTGTCACCCGGCACAGGAAACATTCTGACAAGTTGATGCCAGATATTATAAATAATGCTCTAAGCATAGTCAAATTTAGCAAAAATACCAGCAGACTTCCTTTCCTTTTAGAAAGAATTCTCTCCCTGGGTTTTGATGTAATTTCGAATGTGCTGGAGACTGGCCCTGGATGGCGGTTAGTTTCCCCACATTTTACAACTCTATTGGAATCTGCAATCTTTCCAGCATTGATAATGAATGAGAAAGACATCTCAGAGTGGGAAGAAGATGCTGATGAGTATATACGGAAGAATCTTCCTTCAGATATTGACGAAATTAGTGGATGGAGGGAGGATTTATTCACTGCCAGAAAAAGTGCAGTAAATTTACTTGGTGTAATTTCAATGTCAAAGGGGCCACCAATGGAGACTTCCATAGACAGTTTATCAGCCAAACGTAAAAAGGGTCAAAAGAACAAAAGAAGCAATCAGCGCCGTTCTATGGGGGAATTATTGGTGCTTCCTTTTTTGTCTAAGTTTCCCATTCCTTCTAATTCCAACTTGTCTCAAAAAAAAGTCCTGAATGATTACTTTGGCGTACTGATGGCATATGGCGGTCTGCAAGAATTTTTGAGAGATCAAGAATCTGGCTTTGTGGCAATTCTCATCCAGACACGGATTTTGCCACTGTATACCATAGCTGTTTCTGTACCACACCTCATTGCAAGTGCAAACTGGGTACTCGGAGAACTAGGCTCCTGTCTACCTGAGGAGACAAGTGCTGATGTATATTCTCAATTGCTTATGGCATTGGTTATGCCGGATAAGCAGGATACTTCTTGCTATCCTGTGCGCGTTTCTGCTGCTGGGGCAATAACTACACTACTTGATAATGATTATATGCCCCCTGATTTTCTACCCCTTCTGCAAGTAATAGTTAGCAACATTGGAAATGATGAGAATGATAGCTCCATCTTATTTCAGCTTCTCAGTTCTATCATGGAAGTTGGTGAGGAGAAAGTTTCAGTTCATATCCCACACATTATTCCATCTCTTGTGGGATCAGTCTCAAAATGGTTAACTTCCAATTTGGAGCCTTGGCCTCAGGTGGTTGAGCGTGGAATCTCTACTCTGGCTGTTATGGGTCAGACATGGGAAGAGTCTAGGCCTGAAGTATCTGATTCTGAATCAAATGATTTGCAAGAAAAATGGGTTGCAGATCAGGCGGCAATTGGCAGAGCTTTTGCTGCACTGTTGCAGCAGGTTTGGCTAACACCTTTGTCCATACAGGATCAAGAAGACCAGAATTTTCCGACTTCATGCATAGAAGATTTGTCAACTTTGCTACGGTCTGTCATGCTCTCTATTGATTCAAGCCACTTGATTCAAGAGCTGAAAGTGTCAGAGCTGCTGCCAGTTTGGGCTGAAATGATTGCAGAGTGGCACGCATGGGAGGAATCAGAAGATTTGTCAATTTTTGATGTGATTAAGGAAATCGTGAATTTAGATCGTTCATACATGCTGAAAAACTTTCTTGTTAAAGAGGTTCCACCCCCTCCAGCTCCACCTGTGCCTGAACGTTCAATTATAGAAGGGATTGGCACTTTTGTTAGTAAGGCCATTAAGCAATATCCTTCTGCCACTTATAGAGCTTGCTCATGTGTCCATGCATTACTACACTGTCCAACCTACTCAATTGAAACTGAAGGTGTAAAACAATCATTGGTAATTGTTTTTAGTCGGGCAGCCTTCTCTCACTTTGTTGAAGTTCGAAGTACGCCCATTTCACTCTGGAAGCCTCTATTGCTTGCTATATCTTCATGTTATCTGTGTTATCCTGAAATTGTAGAAGGTGTTATTGAAAAAAGTGAAGCGGGAGGTATCACAATTTGGGCATCTGCATTGTGTCATTTGTCCAGTAGCTCCTTTGAGGCTGCTGGTCTGACAACAGAGTCAGAGATGAAGTTAATTGTGTTGACACTGGCGCGATTGATTGAGCAACTTTTGAAACAAGGGAAGCCATGTCGTGATTCATTTCACAACTACTTAACTTCACTAATGGAGGTATCCATTCAGTTGAAAGAATTACAAGATGAGAAAGGAGATGAAGAAGAAGCTGAAGATGATGACGATGATGATGATGCCGAGGATGAGGATAGTGACGATGATGACTCTGAAGATTATGATGAGGACTCCGAGGTTGAAGAATATGAAGAAACACAAGAAGAGTTTCTTGAAAGGTATGCTAAAGCTGCCGTGGCACTGGAAGATGATTTAGTTATTGAAGAGGGGGATGTTGAAGATGAAGAACTAGATATGGAATTAGGTCAATTACTTGATGTTGATGAGCAGAAAGTTGTATTGTCCTTGATAGACCAATACCATCATGTGCTTATACAAGGACAAGGTTTGCCCTCGCAGGTCATCACGAGTTTTCTGAATGCCTTCCCCCAGTATGGTTTGTATTTCCAGCAAAACTGA 3300 0.4227 MAEVTLIAHLLNQTLSPDAAAVRAATDELDRLSPTPHFPFHLLSISTGGENQGQKIAAATYLKNHTRRNVDSSGATPSNVSKEFKDQLMQALLQVEFPVLKILVEVFRVVAAADFVKQSLWPDLVPNLQSAIQNSHLINGSNSTWNTINALIVLHALIRPFQYFLNPKIAKEPVPPQLELIAKEILVPLLAVFHQFVGKAIASNGSADLETEKAILTICKCLHFAVKSYMPLTLVPLLNSFSRDLMSILSSLSFDCTVTQEDVYLTRWKSGKRSLLIFSSLVTRHRKHSDKLMPDIINNALSIVKFSKNTSRLPFLLERILSLGFDVISNVLETGPGWRLVSPHFTTLLESAIFPALIMNEKDISEWEEDADEYIRKNLPSDIDEISGWREDLFTARKSAVNLLGVISMSKGPPMETSIDSLSAKRKKGQKNKRSNQRRSMGELLVLPFLSKFPIPSNSNLSQKKVLNDYFGVLMAYGGLQEFLRDQESGFVAILIQTRILPLYTIAVSVPHLIASANWVLGELGSCLPEETSADVYSQLLMALVMPDKQDTSCYPVRVSAAGAITTLLDNDYMPPDFLPLLQVIVSNIGNDENDSSILFQLLSSIMEVGEEKVSVHIPHIIPSLVGSVSKWLTSNLEPWPQVVERGISTLAVMGQTWEESRPEVSDSESNDLQEKWVADQAAIGRAFAALLQQVWLTPLSIQDQEDQNFPTSCIEDLSTLLRSVMLSIDSSHLIQELKVSELLPVWAEMIAEWHAWEESEDLSIFDVIKEIVNLDRSYMLKNFLVKEVPPPPAPPVPERSIIEGIGTFVSKAIKQYPSATYRACSCVHALLHCPTYSIETEGVKQSLVIVFSRAAFSHFVEVRSTPISLWKPLLLAISSCYLCYPEIVEGVIEKSEAGGITIWASALCHLSSSSFEAAGLTTESEMKLIVLTLARLIEQLLKQGKPCRDSFHNYLTSLMEVSIQLKELQDEKGDEEEAEDDDDDDDAEDEDSDDDDSEDYDEDSEVEEYEETQEEFLERYAKAAVALEDDLVIEEGDVEDEELDMELGQLLDVDEQKVVLSLIDQYHHVLIQGQGLPSQVITSFLNAFPQYGLYFQQN 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00938 1099 SUPERFAMILY ARM repeat 1 1014 IPR016024 -
Vivi1g00938 1099 ProSiteProfiles Importin-beta N-terminal domain profile. 25 94 IPR001494 GO:0006886|GO:0031267
Vivi1g00938 1099 MobiDBLite consensus disorder prediction 973 1012 - -
Vivi1g00938 1099 MobiDBLite consensus disorder prediction 969 1012 - -
Vivi1g00938 1099 Gene3D - 1 1033 IPR011989 -
Vivi1g00938 1099 MobiDBLite consensus disorder prediction 415 437 - -
Vivi1g00938 1099 Pfam Importin-beta N-terminal domain 25 94 IPR001494 GO:0006886|GO:0031267
Vivi1g00938 1099 Coils Coil 959 979 - -
Vivi1g00938 1099 PANTHER IMPORTIN-7, 8, 11 7 1087 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00938 - - aprc:113846276 1667.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00938 1 19662164 19670984 Vivi1g00938 1 19662164 19670984 ECH