Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00631 ATGTGGAGTTCTTTCTGGCGATCCAGAGATCGTTTCTCACTTGATCAACTCAGTTACTTAACTGATCAATTGACGAAAATTCAAGTTGTTACAGATGATAATAAGGATTTTGTTATTGAGGCTCTGAGATCGATTGCCGAGTTGATGACGTATGGCGATCAGCATGACTCGAGCTATTTTGAATTCTTCATGGAAAAACAAGTCATGAGCGAGTTTGTTCGGATTCTTAAAATTAGCAAGATTGTTAGTGTTCCTCTTCAGTTGTTGCAAACAGTTAGCATTTTGGTCCAGAACTTAAGGAATGAACATGCTATATACTACTTGTTTAGTAATGAACATATAAACTACTTGATAACCTACTCGTTCGACTTTCAAAATGAAGAGCTGTTATCTTACTACATATCCTTTTTAAGGGCAATAAGTGGAAAGTTGAACAGGAATACGGTTTCGCTGCTTGTGAAGATGAACGGTGACAAAGTAGTTTCATTTCCCCTGTATGTTGAGGCCATACGCTTTGCCTTTAATGAGGAGAACATGGTCCGCACTGCAGTACGAGCTGTGACACTTAATGTTTATCACGTTGGAGATGACTCTGTAAATAGATACATATCCAGCCCACCTCACACAGATTATTTCTCAAACCTGATATCATTTTTTAGGAAGCAGAGCATGGATTTAAATAAATTGGTTTCTCATACACTGATAAATCCAGGCCCGGATTCAACCTCTACAATTACTGTTGCTATAGATGAAATTGAGGACAACCTATACTACTTCAGTGATATTGTCTCTGCTGGAATTCCCGATGTTGGTAGGCTAATTACTGACAGTATTCTGATGGTTTTGATATTTCCATTACTTCTTCCTTCTCGGAAGATGTCAATTGATAATGACATGCAAAGTAGTTTTGTCACTTCTATCTACTTACTTTGTCGCATCTTGAGGATAATCAAAATTAAAGATTTGGCTAATACCATAGCTGCTGCTCTTTTTTATCCCTCAGAAGCCTTTACAAAAAGTTCTGGGGGTAAACTCAATAGCCATATATCTGGTAATGGTTTCCCATCTGAATGCCAAGTCTCAAATAATGTTAATCTTAGCAAGTCTGATATAAGATACTCAATGTTTAATGTTCCACACTTTTCTAGCTCTTCAGGTTTTCATCCCGACGGTGTTCGCATGCAAAATGGTTGTAGCAGTCCAAATTTGTCTTTAAGGGATGTTTTGCTTGCATATGTAGTAAAAGGAGATGATATACAAGTATTGGGTTCTTTGACTGTGCTAGCAACCCTACTGCAAACTAAAGAACTTGATGAATCAATGCTAGACGAGCTTGGAATTCTTCCACAACGCAAACAACACAAGAAGCTTTTATTGCAAGCTTTAGTTGGCGAGAGTTCAGGTGAAGAGGAACTTTTTTCTTCTAGAAGTAGTTTGACAAAGGATAGCACTGGTAGTGATATTGCTGTGTATCACAAAAAGATCAAGGATCAGTATGGAATATCTTTTCAGTCTTCTGATGTTGGAATTAGTCCTCATACAAATAGATTTCAGGTGATTGATGCATTGGTGAGCCTTTTTTGCCGCTCTAATATATCTGCAGAGACACTATGGGACGGTGGTTGGCTTTTGCGTCAGTTGCTTCCTTACAGTGAATCAGAATTCAACAGCCATCACCATGAAGTTTTGAAAGTTTCATACAAGACCTGTGCTTCTGCTCTTGTAGAGGAGGCTAAAGGCATCTGGACCGACTTACTTATTTCTGTTCTATGTGAGGAATGGCGGAAGTGCAAAAGAGCAATGGAATCATCGTCTCCTCCGAAAGGACCAAACTCTATGCTTTTGCAGCCACATCCACATAAATTTTCTTTACAGGATAACACTCCAAAGGGATCATCATTTTCTGCTGGAGAAAGAATGCAGGAACTGGTGAAGGTATTTGTAGTACTGCACCAACTTCAGTTATTCACTCTTGGGAGAGCTTTACCTGAGCAACCACCAATTCACCCTCCCGGTGATCTTCCCGCAAATTGTCGTGCCAAGACTTCTGGGCTTGATGTATCAGGCCCAAAGGCAGGCACTGACATCAGCCTTGTTAATGCCGTGCCTTGTAGAATTGCTTTCAAGAGTGGCAAAGAACACCATCTTTGCTTTCAAGCAACCTCTTTAGGAATATCTGGCTGGCTTGTTCTTGCAGAAGAATTGCCATCACAGAAGTCCCGTGGAATCGTTCGGGTTGTTGCACCTTTGGCTGGGTGCAATGGTTGA 2268 0.4008 MWSSFWRSRDRFSLDQLSYLTDQLTKIQVVTDDNKDFVIEALRSIAELMTYGDQHDSSYFEFFMEKQVMSEFVRILKISKIVSVPLQLLQTVSILVQNLRNEHAIYYLFSNEHINYLITYSFDFQNEELLSYYISFLRAISGKLNRNTVSLLVKMNGDKVVSFPLYVEAIRFAFNEENMVRTAVRAVTLNVYHVGDDSVNRYISSPPHTDYFSNLISFFRKQSMDLNKLVSHTLINPGPDSTSTITVAIDEIEDNLYYFSDIVSAGIPDVGRLITDSILMVLIFPLLLPSRKMSIDNDMQSSFVTSIYLLCRILRIIKIKDLANTIAAALFYPSEAFTKSSGGKLNSHISGNGFPSECQVSNNVNLSKSDIRYSMFNVPHFSSSSGFHPDGVRMQNGCSSPNLSLRDVLLAYVVKGDDIQVLGSLTVLATLLQTKELDESMLDELGILPQRKQHKKLLLQALVGESSGEEELFSSRSSLTKDSTGSDIAVYHKKIKDQYGISFQSSDVGISPHTNRFQVIDALVSLFCRSNISAETLWDGGWLLRQLLPYSESEFNSHHHEVLKVSYKTCASALVEEAKGIWTDLLISVLCEEWRKCKRAMESSSPPKGPNSMLLQPHPHKFSLQDNTPKGSSFSAGERMQELVKVFVVLHQLQLFTLGRALPEQPPIHPPGDLPANCRAKTSGLDVSGPKAGTDISLVNAVPCRIAFKSGKEHHLCFQATSLGISGWLVLAEELPSQKSRGIVRVVAPLAGCNG 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00631 755 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Vivi1g00631 755 PANTHER UNCHARACTERIZED 1 754 IPR039272 -
Vivi1g00631 755 SUPERFAMILY ARM repeat 32 572 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00631 Vivi-Chr1 13715393 13726958 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00631 K19513 - gmx:100786267 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00631 1 13715393 13726958 Vivi1g00631 1 13715393 13726958 ECH
Vivi1g00631 1 13715393 13726958 Vivi4g02346 4 116111678 116124040 PCT