Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00573 ATGAAGTCGGAAAAAGGTTGGCGTTTAGGAAACATGGGTGATATGCAGATATTGCCCGGGTCTCGGCACCGTCCTCCCATCAGGAAGCCAACGTGGATTATTGTCTTGGTGTTACTTGTATGCGTGTTTCTAATCTGTGCTTATATGTATCCACCGCAAAGTAGTTCCGCCTGTTACATCTTCTCTTCTAGAGGATGCAAGCATTTTGCGGATTGGCTTCCACCTGTTCCAGCAAGAGAGTACACTGATGATGAGATTGCATCGCGTGTTGTGATTAAGGATATTTTGAGCTCACCGCCGGTTGTTTCTAGAAAATCGAAGATTGCCTTCATGTTTTTGTCACCTGGCTCTTTGCCACTTGAAAGATTGTGGGACAGCTTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCATCTAAGCATAAACCATTTCATGTGAGCCGTTATTTTGTCAATCGGGATATACGCAGTGACCAGGTGATTTGGGGAAAAATTTCAATGGTTGATGCAGAGAGACGGATATTAGCGAACGCCCTTCAAGATCCTGATAACCAGTACTTTGTTTTACTTTCTGACAGCTGTGTGCCTCTATATCATTTTGACTATATTTACACATACCTGATGCATACAAATATCAGCTATGTAGACTGCTTTAAGGATCCTGGTCCTCACGGGAATGGGAGGTACTCTGAGCGCATGTTACCTGAAGTTGAGGCCAAAGACTTTAGAAAGGGTGCACAGTGGTTTTCTATGAAGCGGCAGCATGCTGTTATAGTTATGGCTGATTACCTGTATTACTCAAAATTTCGAGCTTACTGTCAGCCGGGTTTCGAGGGGAGGAATTGCATTGCTGATGAACATTACTTGCCAACCTTCTTCCAGATTGTTGATCCTGGTGGAATTGCAAACTGGTCACTAACCCATGTTGACTGGTCTGAGAGAAAATGGCACCCAAAATCTTACAGGGCTGAGGATGTTACTTATGAGCTTTTGAAGAATATCACGTCTGTCGATGTTAGTGTACACGTCACCAGTGATGACAAGAAAGAAGTGCAAAGTTGGCCTTGCTTGTGGAACGGGATGCAGAAACCATGTTACCTATTTGCTAGGAAATTCACTCCTGAAACACTGGACACAGTGTTGCATCTATTTTCTAATTATTCAGCACCTTGA 1182 0.4349 MKSEKGWRLGNMGDMQILPGSRHRPPIRKPTWIIVLVLLVCVFLICAYMYPPQSSSACYIFSSRGCKHFADWLPPVPAREYTDDEIASRVVIKDILSSPPVVSRKSKIAFMFLSPGSLPLERLWDSFFQGHEGKFSVYVHASKHKPFHVSRYFVNRDIRSDQVIWGKISMVDAERRILANALQDPDNQYFVLLSDSCVPLYHFDYIYTYLMHTNISYVDCFKDPGPHGNGRYSERMLPEVEAKDFRKGAQWFSMKRQHAVIVMADYLYYSKFRAYCQPGFEGRNCIADEHYLPTFFQIVDPGGIANWSLTHVDWSERKWHPKSYRAEDVTYELLKNITSVDVSVHVTSDDKKEVQSWPCLWNGMQKPCYLFARKFTPETLDTVLHLFSNYSAP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00573 393 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 35 384 IPR044174 GO:0016757
Vivi1g00573 393 Pfam Core-2/I-Branching enzyme 108 337 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00573 Vivi-Chr1 12581153 12587752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00573 - - gmx:100817202 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00573 1 12581153 12587752 Vivi4g02407 4 118095201 118098282 PCT