Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00561 ATGGGTGTTTCTATGAGAGATTTGGATCCAGCTCTCAAGGGAGCTGGACAAAAAGATGGACTTGAAATATGGCGGATTGAGAATTTTAATCCAGTTCCTATCCCACAGTCTTCTTATGGAAAGTTTTTCAATGGAGACTCATATATTGTCTTGAAGACAACAGCATCAAAAAGTGGTGCTCTACGCCATGATATTCATTATTGGCTTGGTAAAGACACTAGTCAAGATGAAGCTGGTGCCGCAGCCATCAAAACAGTTGAGTTGGATGCAGTTCTAGGAGGACGTGCTGTTCAGTATCGTGAAGTGCAGGGTCATGAAACACAGAAGTTCCTGTCATATTTCAAACCATGCATTATACCACAAGAAGGTGGAGCTGCCTCTGGTTTTAAGCATGTTGAAGCTGAAGAACACACGACACGGTTGTTTGTATGTAAAGGGAAACATGTTGTGAATGTCAAAGAGGTTCCTTTTGCTCGATCTTCGCTCAACCATGATGATATTTTTATTCTGGATACCGAGTCAAAACTATTCCAATTTAATGGTTCCAATTCATGTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTTCAATTTATTAAGGATACCTATCATGATGGGAAATGTGAAGTGGCTTCTATTGAGGATGGAAGGTTGATGGCTGACTCTGAATCTGGAGAGTTCTGGGGTTTGTTTGGTGGATTTGCTCCTCTTCCACGTAAAACATTCAGTGATGATGATAAGACAATTGATTCTCATGATCCAAAGTTGCTTTGTGTTGAAAAAGGGAAGGCAGAGCCTATTGAAACTGATTCTTTGACAAAGGAATTGCTGGACACCAATAAATGCTATATTATAGATTGTGGATTGGAGGTGTATGTTTGGATGGGAAGAAATACCTCTCTTGATGATAGGAAAAGCGCAAGTGGAGCTACAGATGAACTAGTCCGTAGCACCGACCGGCCAAAATCCCAGATAACACGTGTAATTGAAGGATTTGAGACAGTGATGTTCAAGTCCAAATTTGAGTCTTGGCCTCAGACATCTAATCTAACAATGTCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTTAAACGTCAAGGATTAGATGTCAAGGGCCTCTTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTACATCGATTGCACAGGGCATTTACAGGTTTGGCGTGTGAATGGTCAAGAAAAAAAGCTTCTTGCAGGCACTGACCAGTCAAAATTTTATAGTGGAGACTGCTTCATCTTTCAGTATTCATATCCTGGTGAAGATAGGGAGGAATATCTTATAGGAACATGGATTGGACAGAACAGTGTTGAGGAAGAAAGAGCCTCAGCTCATACACTAGCAAGCAAAATGGTCGAGTCAATGAAGTTTCTGCCATCCATGGCTCGTATTTATGAAGGCAATGAAACAATTCAATTTCATTCCATCCTCCAAAGCTTTATTGTTTTTAAGGGCGGACTTGGTGATGCATACAAGAATTACATCGCCGAGAAGGAAATTCCGGATGAGACATACAGGGAGGACAGTGTTGCATTATTCCGCATCCAAGGCTCTGGACCAGACAATATGCAAGCAATACAAGTTGACCCAGTTGCTTCCTCCTTGAATTCCTCTTATTTCTACATACTTCATAGTGAGTCCATTGTTTTTACTTGGTCTGGAAATCTTACTACTTCAGATTACCACGAACTCGTTGAGAGAATGCTGGATTTAATAAAGCCGGATTTACAAGGCAAACCACAAAGGGAAGGTGCAGAATCTGAACAGTTTTGGGAACTATTAGGAGGAAAGACAGAATATCCCAGTCAAAAGATTGTGAGGGAAGCTGAAAATGATCCTCACCTATTTTCATGCAATTTCTCACAAGGAAATTTAAAGGTGACAGAGATACACAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTCACTCTGAAATCTTTGTGTGGGTTGGCCAGCAGGTTGACCCCAAAAGTAGATTGCAGGCTCTACCAATTGGCGAGAAATTTCTTGAGAAAGATTTTCTCCTAGAAACAATATCTCGTTATACTCCAATATATTTTGTCATGGAAGGCAGTGAGCCGTCTTTCTTCACACGCTTCTTTAAATGGGATTCTGCGAAATCTTCAATGCTGGGGAACTCGTTTCAAAGGAAGCTTGCAATCATGAAAAATGGGGGTACTCCACCTTTGGTTAAACCCAAAAGAAGAGCATCTGTATCTTATGGGGGAAGGTCTGGTGGCTTGCCAGAGAAATCACAACGCTCCCGCAGTATGTCTGTTAGTCCTGACCGGGCTCGTGCGCGAGGAAGATCTCCGGCCTTCAATGCCCTGGCAGCTACTTTCGAGAGCTCAAATGTTAGAAACCTTTCAACTCCACCTCCAATGATTAGAAAACTGTACCCAAAATCTAAGACACCAGATTCAGCATCACCAACATCTAAATCTTCATCCATATCTCACATTACTTCTACTTTTGAACGACCATCAGCACGAGGAAGTTTGTTTCCTAGGTCACTTAAAGATACCTCCAAATCAAACCCAGAGACAAATAGTGACAACGAGAAATCTCCGATCAACAGAGAAGAATCTCTTACTATACAAGAAGATGTAAAAGAAGGTGAAGCTCAGGAAGATGTAAAAGAAGGCGAAGCTCAGGAAGATGTAAAAGAAGGTGAAGCTGAAGATAATGAAGGTCTTCCAGTATACCCATATGAAAGTGTTAACACAGCCGCTACCGATCCCATGCCAGACATCGACGTGACTAAACGAGAGGCTTACCTGTCAAACGACGAGTTCAAAGAGAAACTGGGGATGGCCAGGAGCGAATTTTACACGTTACCAAAATGGAAACAGAACAAACTCAAAATGGCTGTTCAGTTGTTCTGA 2931 0.4166 MGVSMRDLDPALKGAGQKDGLEIWRIENFNPVPIPQSSYGKFFNGDSYIVLKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAVLGGRAVQYREVQGHETQKFLSYFKPCIIPQEGGAASGFKHVEAEEHTTRLFVCKGKHVVNVKEVPFARSSLNHDDIFILDTESKLFQFNGSNSCIQERAKALEVVQFIKDTYHDGKCEVASIEDGRLMADSESGEFWGLFGGFAPLPRKTFSDDDKTIDSHDPKLLCVEKGKAEPIETDSLTKELLDTNKCYIIDCGLEVYVWMGRNTSLDDRKSASGATDELVRSTDRPKSQITRVIEGFETVMFKSKFESWPQTSNLTMSEDGRGKVAALLKRQGLDVKGLLKADPVKEEPQPYIDCTGHLQVWRVNGQEKKLLAGTDQSKFYSGDCFIFQYSYPGEDREEYLIGTWIGQNSVEEERASAHTLASKMVESMKFLPSMARIYEGNETIQFHSILQSFIVFKGGLGDAYKNYIAEKEIPDETYREDSVALFRIQGSGPDNMQAIQVDPVASSLNSSYFYILHSESIVFTWSGNLTTSDYHELVERMLDLIKPDLQGKPQREGAESEQFWELLGGKTEYPSQKIVREAENDPHLFSCNFSQGNLKVTEIHNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRLQALPIGEKFLEKDFLLETISRYTPIYFVMEGSEPSFFTRFFKWDSAKSSMLGNSFQRKLAIMKNGGTPPLVKPKRRASVSYGGRSGGLPEKSQRSRSMSVSPDRARARGRSPAFNALAATFESSNVRNLSTPPPMIRKLYPKSKTPDSASPTSKSSSISHITSTFERPSARGSLFPRSLKDTSKSNPETNSDNEKSPINREESLTIQEDVKEGEAQEDVKEGEAQEDVKEGEAEDNEGLPVYPYESVNTAATDPMPDIDVTKREAYLSNDEFKEKLGMARSEFYTLPKWKQNKLKMAVQLF 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00561 976 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Vivi1g00561 976 MobiDBLite consensus disorder prediction 851 868 - -
Vivi1g00561 976 MobiDBLite consensus disorder prediction 869 902 - -
Vivi1g00561 976 FunFam Gelsolin 518 612 - -
Vivi1g00561 976 FunFam Villin-like 1 613 734 - -
Vivi1g00561 976 CDD gelsolin_S2_like 139 232 - -
Vivi1g00561 976 FunFam Villin-4 248 354 - -
Vivi1g00561 976 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Vivi1g00561 976 CDD gelsolin_S5_like 517 608 - -
Vivi1g00561 976 Gene3D Severin 247 356 IPR029006 -
Vivi1g00561 976 SUPERFAMILY Actin depolymerizing proteins 10 147 - -
Vivi1g00561 976 CDD gelsolin_S3_like 254 343 - -
Vivi1g00561 976 FunFam Villin-like 1 132 247 - -
Vivi1g00561 976 FunFam Gelsolin 6 131 - -
Vivi1g00561 976 CDD gelsolin_S1_like 12 124 - -
Vivi1g00561 976 MobiDBLite consensus disorder prediction 820 844 - -
Vivi1g00561 976 ProSiteProfiles Headpiece (HP) domain profile. 911 976 IPR003128 GO:0003779|GO:0007010
Vivi1g00561 976 CDD gelsolin_S4_like 386 485 - -
Vivi1g00561 976 Gene3D Severin 517 612 IPR029006 -
Vivi1g00561 976 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Vivi1g00561 976 SUPERFAMILY Actin depolymerizing proteins 138 240 - -
Vivi1g00561 976 CDD gelsolin_S6_like 621 720 - -
Vivi1g00561 976 MobiDBLite consensus disorder prediction 738 785 - -
Vivi1g00561 976 Pfam Gelsolin repeat 149 214 IPR007123 -
Vivi1g00561 976 Pfam Gelsolin repeat 269 337 IPR007123 -
Vivi1g00561 976 Pfam Gelsolin repeat 636 677 IPR007123 -
Vivi1g00561 976 Pfam Gelsolin repeat 28 111 IPR007123 -
Vivi1g00561 976 Gene3D Severin 133 246 IPR029006 -
Vivi1g00561 976 SMART VHP_1 941 976 IPR003128 GO:0003779|GO:0007010
Vivi1g00561 976 Gene3D Severin 613 735 IPR029006 -
Vivi1g00561 976 PANTHER VILLIN 9 966 IPR007122 GO:0051015
Vivi1g00561 976 Pfam Villin headpiece domain 941 976 IPR003128 GO:0003779|GO:0007010
Vivi1g00561 976 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Vivi1g00561 976 Gene3D Severin 388 500 IPR029006 -
Vivi1g00561 976 SUPERFAMILY VHP, Villin headpiece domain 902 976 IPR036886 GO:0003779|GO:0007010
Vivi1g00561 976 Gene3D Severin 7 132 IPR029006 -
Vivi1g00561 976 SMART VILL_6 19 117 IPR007122 GO:0051015
Vivi1g00561 976 SMART VILL_6 622 719 IPR007122 GO:0051015
Vivi1g00561 976 SMART VILL_6 254 344 IPR007122 GO:0051015
Vivi1g00561 976 SMART VILL_6 519 606 IPR007122 GO:0051015
Vivi1g00561 976 SMART VILL_6 137 234 IPR007122 GO:0051015
Vivi1g00561 976 SMART VILL_6 392 489 IPR007122 GO:0051015
Vivi1g00561 976 MobiDBLite consensus disorder prediction 800 917 - -
Vivi1g00561 976 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Vivi1g00561 976 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Vivi1g00561 976 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Vivi1g00561 976 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Vivi1g00561 976 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Vivi1g00561 976 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Vivi1g00561 976 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Vivi1g00561 976 Gene3D Villin headpiece domain 914 976 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00561 Vivi-Chr1 12346780 12355486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00561 - - vvo:131601117 1934.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00561 1 12346780 12355486 Vivi1g00561 1 12346780 12355486 ECH
Vivi4g02434 4 119540914 119553600 Vivi1g00561 1 12346780 12355486 PCT