Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00162 ATGATCGAGTTGTTTAAGAATTTGAGAGAGATGAAAACAATTCTGTATGGAAATAGTGAAGCTGAACCGGTTCCTGAAGCTTGTTCGCAATTGACTCAGGAGTTTTTCAACGATAACACTCTTCGACTTATCGTTGAGTGTCTTCCAAAATTGAATTTGGAGGCTAGGAAAGATGCTACTCAAGTTGTTGCAAATTTACAGAGGCAGCAGGTTCAATCTAAGCTGATTGCTTCTGATTACTTGGAAAAAAATATGGATCTTATGGATACTTTGATAACAAGCTATGAAAACCCAGAGATGGCTTTGCATTATGGTGCAATGTTAAGGGAGTGCATACGTCATCAGATTGTTGCAAAATATGTTCTAGAAACACCTCATATGAAGAAGTTTTTTGAGTACATTCAAATCCCAAACTTTGATATAGCCGCAGATGCCGCAGCAACTTTTAAGGAACTCATGACGAGACATAAATCTACCGTAGCTGAATTCCTTACCAATAATTATGAATGGTTTTTTGAAGAATATAACTCCAAACTATTGGAATCTTCCAATTATATTACAAGGCGTCAAGCTGTGAAGTTGTTGGGAGATATGTTACTTGATCGCTCAAATGCTGCAATAATGACAAGATATGTCAGCTCGAGAGAGAACTTAAGGATTTTAATGAATCTTATGAGAGAGTCAAGCAAGAGCATACAGATAGAATCATTTCATGTTTTCAAGCTATTTGTTGCTAATCAGAAGAAACCACCAGATATCATCGGCATACTTGTTACCAATAGAAACAAGCTTCTAAGGTTGTTGGGCGACTTGAAAATCGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTCATGAAGGAAATTGCTGCCCTTGAACCTAGGGAGTAG 897 0.3724 MIELFKNLREMKTILYGNSEAEPVPEACSQLTQEFFNDNTLRLIVECLPKLNLEARKDATQVVANLQRQQVQSKLIASDYLEKNMDLMDTLITSYENPEMALHYGAMLRECIRHQIVAKYVLETPHMKKFFEYIQIPNFDIAADAAATFKELMTRHKSTVAEFLTNNYEWFFEEYNSKLLESSNYITRRQAVKLLGDMLLDRSNAAIMTRYVSSRENLRILMNLMRESSKSIQIESFHVFKLFVANQKKPPDIIGILVTNRNKLLRLLGDLKIDKEDEQFEADKAQVMKEIAALEPRE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00162 298 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 2 296 IPR013878 -
Vivi1g00162 298 FunFam putative MO25-like protein At5g47540 1 294 - -
Vivi1g00162 298 Pfam Mo25-like 3 294 IPR013878 -
Vivi1g00162 298 Gene3D - 1 295 IPR011989 -
Vivi1g00162 298 SUPERFAMILY ARM repeat 3 296 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00162 Vivi-Chr1 3088775 3092398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00162 K08272 - gmx:100788031 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00162 1 3088775 3092398 Vivi1g00162 1 3088775 3092398 ECH
Vivi1g00162 1 3088775 3092398 Vivi1g00162 1 3088775 3092398 PCT