Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00099 ATGAAAAGCCTTAGAAAGTCGGATTCTCCGAGGGGAGAGGTTGGAGAGATTGACACAAGGGCACCATTCCAATCTGTCAAAGCAGCTGTTAGTTTATTCGGTGAAGTAGCAGTTCCTAGGGACAGATTCGCTGTCAAGAGAAGATCAGCAGAGAATGTATTTGAAAAGGAGACACAACTTATCTTGGCCCAAAAAGAACTAGGCAAGTTAAAGAAACATGTCGTCAATGCCGAGGCCACGAAAGCGAAAGCACTTTCTGACCTTGAGAAGGCCAAGGAGACCCTTGAGAATTTGACAAACAAGCTGAACAATGTGAGAGAATCCAAGCAATCTGCAATGGAAGCGGCAGAAGCTGTGAAGAATCAAGGCAAGCATTTTGAAAAGACGTTATCTCTAAAAGCTATAGGATATGAAGCTTGGAAACATGAGCTAGAACATGCAAGGAACGCGTACACGACTACGGTAACAAAACTAGATTCTTCCAAGAAAGAACTCACGAAAATCAGGCAAGATTTTGATGCAGTTTTGGAGGCGAAGCTGACAGCAGTCCAGGCAACAGGAGAAGCTCAGCGGTCTGCAAAGTTAAACTCGGAAAGGATTGGTGAACTGTCGGAGGAAATCGCAACGATGAAAGCATCGATAGAACAGTTGAAGCTCACCTCTGCGGCAAATGAAACACAATTTGAGTTTTATAAAACCACAAAAGAAGAAGCACAGAAGAAGCTGGAGGCTTTGAAGAATGAATATAATGATCCAGAACTAATCCAAAGTCTTGACGCAAAACTTGCTGAAACAAGTGCGGAGATTGAGGTTCTTCAAGAGCAGATGAAAAAGATCCATGCTTCTAAGATGGATTCTGTGAGACTTCTAACTTCAGAACTCAAAGAAGCGACAAAGAAACTGCAGGAGGTTTCTGCAGAAGAAAACTCCCTTAAAAAGCTAGTGTACATGCTTAGGACAGAACTGAAACAAGTGAAGAAGGAGCAAGATGAACTGAAGGAGAAGAAACAAGCAGCAGAAGATCTTGCTGCTAACCTCGCCGACGAATTGGAAGAGAGCAAGGAAGAGGCAGGGCCTCAGCCAGGTACTGTGGAGGATCTTGAAGCTGATATCTTCTACATGCAGAATTCCAAAGTCCAGAAGTTACAATCGGAGACAGAAGATGCAAAAAGAGAAGCAGAAGAGATGAGAAGAAAGGCTCAGGAACTGAAGCAAGAAGCAGAAAAATCCCGAGCAGTGGCTGACGAAGCAGAGAAAAACCTGGAACTTGTACTGAAAGAGGCCAAAGCAGCAAAAGCATCAGAACTAAAAGCCATCAAAGAGATGAAGATTTTGTCCGACGTGCAAAGTAGACTCTCGAATTCAAAATTCAGCGGTAAAATCGGGATGCGAAATGAAGAGTTTGAGTCATTGAATGGAAAAGTGAAGCAAATTCAAGATTTGGCAGAAAAGAAAGAGGCATCTGTCATGGCTGAGCTGCAAGAAATGTACACAAGGAAAAATGAACTCGACAGAAAGGTGGAAGCTAGCCAGAAAGTTATTGAGGAAACAAAGGCTGCAATGGAGACAGCTTTGTGGTATGCAGAGATGGCAGATTCAGCTAAAGTGGCAATGGAGCATGAACTAACCAGATGCCGTCAACCTGGTAGTACGAATTCCCGGATATCAGATTGTTCTGATAATTCTTCAATATTGAGCAACTAG 1704 0.4313 MKSLRKSDSPRGEVGEIDTRAPFQSVKAAVSLFGEVAVPRDRFAVKRRSAENVFEKETQLILAQKELGKLKKHVVNAEATKAKALSDLEKAKETLENLTNKLNNVRESKQSAMEAAEAVKNQGKHFEKTLSLKAIGYEAWKHELEHARNAYTTTVTKLDSSKKELTKIRQDFDAVLEAKLTAVQATGEAQRSAKLNSERIGELSEEIATMKASIEQLKLTSAANETQFEFYKTTKEEAQKKLEALKNEYNDPELIQSLDAKLAETSAEIEVLQEQMKKIHASKMDSVRLLTSELKEATKKLQEVSAEENSLKKLVYMLRTELKQVKKEQDELKEKKQAAEDLAANLADELEESKEEAGPQPGTVEDLEADIFYMQNSKVQKLQSETEDAKREAEEMRRKAQELKQEAEKSRAVADEAEKNLELVLKEAKAAKASELKAIKEMKILSDVQSRLSNSKFSGKIGMRNEEFESLNGKVKQIQDLAEKKEASVMAELQEMYTRKNELDRKVEASQKVIEETKAAMETALWYAEMADSAKVAMEHELTRCRQPGSTNSRISDCSDNSSILSN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00099 567 MobiDBLite consensus disorder prediction 382 404 - -
Vivi1g00099 567 MobiDBLite consensus disorder prediction 545 567 - -
Vivi1g00099 567 Coils Coil 74 122 - -
Vivi1g00099 567 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 549 - -
Vivi1g00099 567 Coils Coil 200 220 - -
Vivi1g00099 567 MobiDBLite consensus disorder prediction 383 404 - -
Vivi1g00099 567 Coils Coil 228 282 - -
Vivi1g00099 567 Coils Coil 500 520 - -
Vivi1g00099 567 Coils Coil 287 356 - -
Vivi1g00099 567 Pfam Weak chloroplast movement under blue light 238 546 IPR008545 -
Vivi1g00099 567 Pfam Weak chloroplast movement under blue light 16 231 IPR008545 -
Vivi1g00099 567 Coils Coil 379 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00099 Vivi-Chr1 1795064 1797828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00099 - - gmx:100796853 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00099 1 1795064 1797828 Vivi1g00099 1 1795064 1797828 ECH
Vivi1g00099 1 1795064 1797828 Vivi1g00099 1 1795064 1797828 PCT