Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03942 ATGTCGAGCATCGTCAAGGAGATCCTGGCGAGCCCGATACAACTGGCGGACCAGGTATCGAAGATGGCGGAGGAGGCCCAGAATTTCCGACAGGAATGTCTCGAGCTCAAATCCAAAACGGAGAAGCTCGCAGGGCTCCTCCGCCAGGCTGCGAGGAACAGCAGCGACTTATACGAGCGTCCCACGCGGCGCATCATCGACGACACCGAACAAGTCCTGGACAAGGCCCTCGTACTCGTCACCAAATGCCGCGCCAACAGTGTCATCAAAAGACTCTTCACCATCATCCCCGCCACAGCATTCCGCAAGACCTCCATGCAGCTAGAGAATTCCGTCGGCGATGTCCAGTGGCTCCTCCGCGTCTCTGCGTCCGCCGACGAGCGTGACGACGAGTACCTCGGGCTTCCCCCCATCGCCGCCAACGAACCCATCCTCTGCCTCATCTGGGAACAGGTCGCCATTCTCCTGTCCGGCGCCTCCCTGGACGAGCGCTCCGACGCCGCCGCTTCATTGGTTTCGCTGGCTCGCGACAATGACCGTTACGGGAGACTGATCATCGAAGAGGGTGGCGTGCCCCCGTTGTTGAAGCTTCTGAAGGAAGGACATTTGGAAGGACAGGAGAACGCTGCCAGAGCCATTGGGCTTCTGGGGAAAGACCCTGAAAGTGTGGAACACATTGTGAACGCCGGTGTTTGTTCCGTGTTTGCCAAAATCCTCAAAGACGGTCATATGAAGGTTCAGGCGGTGGTGGCCTGGGCTATTTCTGAACTCGCTGCCAATCACCCCAAATGCCAAGACCATTTTTCCCAGAACAATGCCATACGATTGCTCGTTAGCCATCTCGCCTTCGAGACCATTCAAGAGCATAGCAAGTACGCCATTGCCAACAAGCACAAGTCCCTTCACACCTTAGTTTTGGAGAGTAATAATACGCAGGAAGAAGAAGATGATAAGAACGTTGTTGGACGTCCGACGGGGGCCAACACATCCAATCAGATGCACAACGTGGTTTCCAACACCATGGCAATGAAGGGCATTACCCCAAAAAATAATGCCACCCCCACGGGTAACCACAACAACACCGGCGGCGGCACGAACACCAAAAAACCTCACGGTGGGACACAGCACGTGTCAATTGCTGGGACGAGTATCAAGGGGAGGGAATACGAAGACCCCATCACAAAGATAGAGATGAAGGCGATGGCAGCAAGAGCCTTATGGCAACTGGCGAGGGGTAACTTGAGTGTGTGTAGGAGCATAACAGAGTCAAGGGCTCTTCTGTGTTTCGCGGTTTTGCTCGAAAAGGGTCCCGAAGACGTCCAATCTTATTCCGCAATGGCGTTGATGGAAATAACGGCCGTGTCGGAGCAACATGCAGAGCTGAGACGCTCTGCATTCAAACCCACCGCCCCTGCCGCCAAGGCTGTTCTGGATCAGCTTCTTAGAGTGATAGAAAACGAACAAATTGACCTTCTCGTACCTTGCATCAGATCCGTTGGTAATTTGGCGAGAACTTTCAGAGCAACCGAGACAAGACTGATTGGGCCATTGGTGAGGCTCCTTGACGAGAGAGAAGCCCATGTTAGCACGGAAGCCGCCATTGCTCTGAACAAATTTGCTTGCACGGATAACTACCTCCACGAGAATCACTGCAACGCCATCATAGAGGCCGGTGGCGCCAAGCACTTGATTCAACTGGTTTACTTTGGTGAGCAAATGGTTCAGATTCCTTCCGTGACTCTCCTTTGTTACATAGCGCTCCACGTCCCCAAGAGCGAGACGCTGGCACAGGAAGAGGTTCTGATAGTTCTTGAGTGGTGCACCAAACAGGCACATCTGGTGGAGGAACACGGCATTATACAACTTCTACCAGAAGCCAAGAGTAGACTCGAACTGTATCAATCAAGAGGAAGAGGATTTCGCTGA 1926 0.5358 MSSIVKEILASPIQLADQVSKMAEEAQNFRQECLELKSKTEKLAGLLRQAARNSSDLYERPTRRIIDDTEQVLDKALVLVTKCRANSVIKRLFTIIPATAFRKTSMQLENSVGDVQWLLRVSASADERDDEYLGLPPIAANEPILCLIWEQVAILLSGASLDERSDAAASLVSLARDNDRYGRLIIEEGGVPPLLKLLKEGHLEGQENAARAIGLLGKDPESVEHIVNAGVCSVFAKILKDGHMKVQAVVAWAISELAANHPKCQDHFSQNNAIRLLVSHLAFETIQEHSKYAIANKHKSLHTLVLESNNTQEEEDDKNVVGRPTGANTSNQMHNVVSNTMAMKGITPKNNATPTGNHNNTGGGTNTKKPHGGTQHVSIAGTSIKGREYEDPITKIEMKAMAARALWQLARGNLSVCRSITESRALLCFAVLLEKGPEDVQSYSAMALMEITAVSEQHAELRRSAFKPTAPAAKAVLDQLLRVIENEQIDLLVPCIRSVGNLARTFRATETRLIGPLVRLLDEREAHVSTEAAIALNKFACTDNYLHENHCNAIIEAGGAKHLIQLVYFGEQMVQIPSVTLLCYIALHVPKSETLAQEEVLIVLEWCTKQAHLVEEHGIIQLLPEAKSRLELYQSRGRGFR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03942 641 SMART arm_5 547 587 IPR000225 GO:0005515
Viun9g03942 641 SMART arm_5 177 218 IPR000225 GO:0005515
Viun9g03942 641 SMART arm_5 413 453 IPR000225 GO:0005515
Viun9g03942 641 SMART arm_5 219 259 IPR000225 GO:0005515
Viun9g03942 641 FunFam Armadillo repeat only 2 376 630 - -
Viun9g03942 641 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Viun9g03942 641 MobiDBLite consensus disorder prediction 308 332 - -
Viun9g03942 641 Gene3D - 151 317 IPR011989 -
Viun9g03942 641 SUPERFAMILY ARM repeat 155 623 IPR016024 -
Viun9g03942 641 PANTHER ARMADILLO REPEAT ONLY 4 1 637 - -
Viun9g03942 641 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Viun9g03942 641 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Viun9g03942 641 MobiDBLite consensus disorder prediction 350 377 - -
Viun9g03942 641 Coils Coil 19 39 - -
Viun9g03942 641 Gene3D - 3 121 IPR036537 GO:0007166
Viun9g03942 641 FunFam Armadillo repeat only 2 150 319 - -
Viun9g03942 641 Gene3D - 386 628 IPR011989 -
Viun9g03942 641 FunFam Armadillo repeat only 4 2 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03942 Viun-Chr9 43447025 43449297 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03942 - - vun:114164601 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03942 9 43447025 43449297 Viun9g03942 9 43447025 43449297 ECH