Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03892 ATGGAAGCTATCAGAAAGCAAGCCTCCAAACTTCGAGAACAGGTCGCTCGCCAGCAACAGGCTGTGCTTAAACAGTTTGGGGCTGGGGGATATGGAGGCTCAGATAATATGGTTACCGATGAGGTTGAACTTCAACAACATCAGAAACTTGAGAAGCTTTACATATCAACACGGGCTGGAAAGCATTATCAAAGGGATATTGTCCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAACAAGTTGAAATAGGAACGAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTACCAGTGGTAGTACCTTATCAAGAGCAGCACTAAACTATTCACGTGCCCGTGCACAAATGGAGAAGGAGCGTGGGAGCTTACTAAAAGCACTTGGAACGCAGGTTGCGGAGCCCTTAAGAGCAATGGTGATGGGAGCACCGTTGGAGGATGCCCGGCATCTTGCTCAACGATATGACAGAATGCGGCAGGAAGCCGAAGCCCAGGCTATTGAAGTTTCCAAACGCCAGGCAAAAGTAAGAGAAACACCAGGCAATACTGAGAATGCAATGAAACTGGAAGCAGCTGAAGTTAAGCTGCAAGACCTGAAGACAAACATGGCCATATTGGGAAAAGAAGCAGCTGCTGCAATGGCCGCTGTTGAAGCGCAGCAACAGAGGTTAACCCTCCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGAGCCTATCATCAAAGAGTACTCCAAATACTTGATCAGCTAGAGGGAGAGATGATATCAGAACGACAGCGGATTGAAGCCCCTCCTCCACCGAGTGTGGATAATATGCCACCACCTCCATCATATGAAGAAGTAAATGGTGTATATGCTTCTCAAGCACATAATGGCTCAACAGATAGTATGGGTTACTTCTTAGGAGAGGTTTTGTTTCCCTACCATGCGGAGTCAGAAGTTGAATTGAATCTCTCAGTTGGGGATTATATCGTTGTTAGAAAGGTGACCAACAATGGATGGGCTGAGGGCGAATGCAAAGGGAAAGCAGGTTGGTTTCCATTTGGTTACATTGAAAGAAGGGAGCGAGTCCTTGCAAGCAAGGTGGCTGAAGTGTTTTGA 1113 0.4627 MEAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEVELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGADNTCTSGSTLSRAALNYSRARAQMEKERGSLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVRETPGNTENAMKLEAAEVKLQDLKTNMAILGKEAAAAMAAVEAQQQRLTLQRLIAMVEAERAYHQRVLQILDQLEGEMISERQRIEAPPPPSVDNMPPPPSYEEVNGVYASQAHNGSTDSMGYFLGEVLFPYHAESEVELNLSVGDYIVVRKVTNNGWAEGECKGKAGWFPFGYIERRERVLASKVAEVF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03892 370 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Viun9g03892 370 SUPERFAMILY BAR/IMD domain-like 47 258 IPR027267 -
Viun9g03892 370 Coils Coil 1 21 - -
Viun9g03892 370 ProSiteProfiles Src homology 3 (SH3) domain profile. 301 360 IPR001452 GO:0005515
Viun9g03892 370 Coils Coil 220 240 - -
Viun9g03892 370 PANTHER SH3 DOMAIN-CONTAINING 16 358 - -
Viun9g03892 370 SMART SH3_2 304 359 IPR001452 GO:0005515
Viun9g03892 370 Gene3D SH3 Domains 291 368 - -
Viun9g03892 370 Pfam Variant SH3 domain 308 356 IPR001452 GO:0005515
Viun9g03892 370 Coils Coil 193 213 - -
Viun9g03892 370 SUPERFAMILY SH3-domain 263 358 IPR036028 GO:0005515
Viun9g03892 370 Coils Coil 149 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03892 Viun-Chr9 43174272 43179906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03892 - - gmx:100783004 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03892 9 43174272 43179906 Viun9g03892 9 43174272 43179906 ECH