Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03852 ATGGAGGGAAGTGGCGGTGGTGCTGCTCCGTCGTCTGCGCCGGTGAAGCAATATCTGCAGGAGTTCTCTAAGCTGTTTCAGTATTATCTGGACAAATCTACCCCTCATTCCGCCTACAGATGGATTGGGACATTGGTCATGGCATCCATCTACGTCTTGCGTATTGTTTACGTTCAGGGGTTTTACGTTGTCTCTTACGGCCTCGGAATCTACCTCCTCAATCTCTTGATTGGTTTTCTATCCCCTTTGGTTGATCCAGAGCTCGATCCCTCCAACTCCCCTTTGCTTCCCACCAAAGGATCCGATGAGTTCAAACCCTTCATTCGCCGCCTCCCTGAGTTTAAGTTCTGGTATTCTTTCACCAAGGCTCTCTGCATAGCGTTTGTGATGACCTTCTTTTCCCCGTTTGATGTTCCTGTCTTTTGGCCTATATTACTCTGTTACTGGTTTGTTCTCTTTGTCCTTACAATGAGGCGCCAAGTTGCACACATGATCAAATACAAATATATCCCATTTAACTTGGGGAAGCAGAAGTATACTGGTAAGAAATCTTCTGCAGGTAGCAGTGGCTCTCGAGCAGACTGA 585 0.4701 MEGSGGGAAPSSAPVKQYLQEFSKLFQYYLDKSTPHSAYRWIGTLVMASIYVLRIVYVQGFYVVSYGLGIYLLNLLIGFLSPLVDPELDPSNSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFSPFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNLGKQKYTGKKSSAGSSGSRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03852 194 PANTHER PROTEIN RER1 11 186 IPR004932 GO:0016020
Viun9g03852 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016020
Viun9g03852 194 Pfam Rer1 family 19 180 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03852 Viun-Chr9 42986770 42989145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03852 1 194 Miscellaneous Gene Families AT2G21600 73.333 3.51e-106 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03852 - - gmx:100817031 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03852 9 42986770 42989145 Viun9g03852 9 42986770 42989145 ECH