Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03770 ATGTTTTCTGGAAGATTGGGGGCAGACGAATCTTATTGTCAAGATTTACAGAATTTGAGTGTGTCAAAGCGACTTGTGAGGAGTTTCAGTCAGAGGTTGAAGAAGAAGAATAACAGGAATGCGGTGGAAGAAGATGATGATGATGTGAATGGAGTTTCTTTAAGATGCTTAAATCTTTATGGACGAGGTGGGGGTTGCAAGGTAGGTGCTGACACCAGTGATGATTTTGGTGATTCAAACAGTAGAAGGAGATCTAGTGCCAGTGACGAGGGAAAGGGATATAAGCCGATTTGTGGCCCTGAAGAAACTGCTGTGGATTGCTTTTCATATGGGGTGAAGGACAGGTTTTGGAGGAGACACAACCGAAAGAATTCAGAGCTTGAAGAATTTTTGACAAACAACAGAATGCATATCTTTCTTCCTGATGATATTCTTGAAATGTGTTTGGTGAGGCTCCCATTGACAAGTCTCATGAATGCCCGACTTGTGTGCAAAAAATGGAGGTCCTTGACCACCACTCCTAGGTTTCTCCAAATGAGAAGGGAGGGTTCCTACCAGAGTCCATGGTTGTTTCTGTTTGGTGCTGTTAAAGATGGTTTTTGTTCTGGTGAGATACATGCACTTGACGTGTCTCTGAATCAATGGCACAGGATTGATGCTCATTTTCTCCGAGGAAGGTTCCTGTTCTCTGTTGCCGGTATACATGATGATATCTTCATTGTTGGAGGGTGTTCTAGCCTGACTAACTTCGGGAAAGTGGATAGAAGCTCCTACAGGACACACAAAGGGGTTCTTGTGTTTAGTCCATTGACAAAATCTTGGCGCAAAATGCCCTACATGAAATATGCTAGATCAAATCCTATATTAGGAGTCTCTGAGGTCAGTTTGGATTTTCCAACTTGCCAGAGTCATCAAAATCGCCCGGATAGACGCTTTCCAAGATCGAGGATTGGTGGCATTTCAGATGTTTATGAGGATCCTCACAAGCTTTCGCTGAGACGTCACTGCAGATCTTCTTTTAATGAGACTGAAGCTTTGTCTTTGCCCAGTCGAAAGGCATACAAATTTGTTAGACAAAAAAGTGACCATTCAAGCTCAAAGGGCAGTAAGAGGTTCTTGTTGATAGCTGTAGGAGGTTTGGGATCCTGGGATGAGCCTCTGGACTCTGGAGAAATCTATGATTCTGTGTCAAATAAATGGACTGAAATCCCAAGATTACCTTTTGATTTTGGGGTTGCTCGTTCTGGAATTGTTTGTGGCAGAATGTTCTATGTTTATTCTGAAACAGACAAGCTTGCAGCATATGACATTGAACGAGGTTGTTGGATTGGAATTCAAACCACACCGATCCCGCCTCGTGTCCACGAATACTACCCCATACTTGTATCTTCTAGTGGCCGGCTTTTCATGTTTTCTGTGTCCTGGTGTGAAGGAGATGGTCAAATTGGGCAACGAAACAAGGCTGTTAGAAAACTATGGGAGTTGGATCTCGCGTATCTCACCTGGACTGAAGCCTCAGTTCATCCTGATGCTCCAATGGACTGGAGTGCTGTTTTTCTGTCGGATAAAAACCTCATTTTTGGGGTAGAGATGTTCAAAATATTTGGTCGGGTGTTAGGTTTTTTCACTGTTTGTGATGTGTCTGATATCACAAAATGGAACCATATTTCAGGGAACCATGTTACTCATGAGCTCGATGGTTCTTCCTGCTTGACCAAATCTGTGGCAGTGCTACACCTTTGA 1743 0.4326 MFSGRLGADESYCQDLQNLSVSKRLVRSFSQRLKKKNNRNAVEEDDDDVNGVSLRCLNLYGRGGGCKVGADTSDDFGDSNSRRRSSASDEGKGYKPICGPEETAVDCFSYGVKDRFWRRHNRKNSELEEFLTNNRMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQMRREGSYQSPWLFLFGAVKDGFCSGEIHALDVSLNQWHRIDAHFLRGRFLFSVAGIHDDIFIVGGCSSLTNFGKVDRSSYRTHKGVLVFSPLTKSWRKMPYMKYARSNPILGVSEVSLDFPTCQSHQNRPDRRFPRSRIGGISDVYEDPHKLSLRRHCRSSFNETEALSLPSRKAYKFVRQKSDHSSSKGSKRFLLIAVGGLGSWDEPLDSGEIYDSVSNKWTEIPRLPFDFGVARSGIVCGRMFYVYSETDKLAAYDIERGCWIGIQTTPIPPRVHEYYPILVSSSGRLFMFSVSWCEGDGQIGQRNKAVRKLWELDLAYLTWTEASVHPDAPMDWSAVFLSDKNLIFGVEMFKIFGRVLGFFTVCDVSDITKWNHISGNHVTHELDGSSCLTKSVAVLHL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03770 580 Pfam Kelch motif 374 407 IPR006652 GO:0005515
Viun9g03770 580 Pfam Kelch motif 226 280 IPR006652 GO:0005515
Viun9g03770 580 SUPERFAMILY Kelch motif 188 528 IPR015915 GO:0005515
Viun9g03770 580 MobiDBLite consensus disorder prediction 75 95 - -
Viun9g03770 580 Pfam F-box domain 140 176 IPR001810 GO:0005515
Viun9g03770 580 SMART kelc_smart 237 294 IPR006652 GO:0005515
Viun9g03770 580 SMART kelc_smart 373 417 IPR006652 GO:0005515
Viun9g03770 580 SUPERFAMILY F-box domain 140 201 IPR036047 GO:0005515
Viun9g03770 580 Gene3D - 345 564 IPR015915 GO:0005515
Viun9g03770 580 Gene3D - 152 295 IPR015915 GO:0005515
Viun9g03770 580 FunFam F-box/kelch-repeat protein At5g42360 365 568 - -
Viun9g03770 580 ProSiteProfiles F-box domain profile. 134 180 IPR001810 GO:0005515
Viun9g03770 580 SMART fbox_2 140 180 IPR001810 GO:0005515
Viun9g03770 580 PANTHER OS09G0555300 PROTEIN 1 580 - -
Viun9g03770 580 FunFam F-box/kelch-repeat protein isoform A 153 301 - -
Viun9g03770 580 CDD F-box_AtFBW1-like 139 176 - -
Viun9g03770 580 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03770 Viun-Chr9 42660310 42663339 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03770 - - ccaj:109802378 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03770 9 42660310 42663339 Viun9g03770 9 42660310 42663339 ECH