Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03767 ATGGCGGCTCCCAACATGGATCAGTTCGAAGCGTATTTCAGGAGAGCAGATTTGGACGGAGATGGCAGAATCAGTGGAGTTGAAGCCGTCTCTTTTTTCATGGGATCCAATTTGCCCAAACAAGTCCTCGCTCAGGTGTGGGCGTATGCTGATCAGGCCAAAACTGGTTTCCTTGGACGCGCAGAGTTTTTTAATGCTCTGAGGTTAGTTACTGTGGCTCAGAGTAAGCGAGATTTAACGCCTGACATTGTGAAGGCAGCTTTATATGGTCCTGCTGCTGCTAAAATCCCTGCGCCGCAGATTAATCTTGCTTCTGTACCTCAACCTGTCCCGAATGCGAGGCCCCATGCTGGGTCTGTTGGGCAGATGGGTGTTACTGCACCCAATTCGGCTCAAGGTTTTGCCTATAGAGGACAAGGGTTAGCAGGTCCTGGTGCAAACCCGCAATATTATCCTTCGCAGCAGAATCCTGCCATCAGACCTCATCAATCCATGCCTGTTTCTGGCGCTCCGCATCTGCAACAGGGTGTTGCAGGCCCAGATATTTCTAGAGGAGTTAACATGGGTGGTCACAATTTCTCAAATCCTGGGCTCTCAAATGATTGGAATAAAGCCAGGCCTGGTATGGTGGCCACCAGACCTGCAGGAATGAACCCGTCGGCTGCCTTACAGACATCACAATCTCCTGTTTCACCAATGCCCCAGTCATCTCCAGTTTCTCCAATGCCACAGTTATCTCCAGTCTCACCAATGCCCCAGTCAACAACTGTTCACACTAAAGCATTGGGTGTTTCTGGAAATGGGTTCTCTTCCAATCCAGCTTTGGGCAATGATTTTTTCTCTGCCGCCTCATCAACACCGAAACAAGAACCTGCTGGGCACAGTTATTCTGTTTCCAATGTCTCATCAGCCATTGTTCCTGTTTCCACTGGTCCCCAGCCTGCAAATAAGCAAAATTCACTAGATTCATTGCAGAGTGCATTCTCATCAGTGTTGCCTGCAAATAGTCAGTTTCAGCGGCCACAGTCTGCACCAAACCAGCAAATTAAACCTCAAGCTTCTTCTTCTCCACATACACCATCTGGGATGACAGGTGGGGTTGGAAATGCAAATTCTGACAATGTGCAGCTTTCTTGGCCAAAAATGAAACCTACTGATGTGCAGAAATATACAAAGGTGTTTTTGGAAGTTGACACTGACAGGGATGGGAAGATCACTGGGGAGCAGGCACGCAGTCTTTTTTTAAGCTGGAGATTACCAATAGAGGTTTTAAAGAAGGTGTGGGACTTGTCTGATCAGGACAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTTTATTTGATGGAACGGTACAGGGAAGGTCGTCCTCTTCCACAGTCTCTTCCAAGCAATGTCATGTTTGATGAGACATTGATGTCTATGACAGGCCAACCAAAAAATGCTCCTGGAAATGCAGCCTGGGGTATCAACCAAGGTTTTCAGCAGCAGCAACAAGGGATGCCAGGTGCTCGGCCAGTGGCACCAACTGCTGGTTTCAGGCCACCAGTCCATGGAAGTTCTGCTCAGGCTGATTTCACTACGCAGCCCAACCAGCAAAAATCAGGAACACCTGTGTTGGAGGAGTCCTTTCTGAATCGCACAGATAGTGGTGAGCAGAATGCATCGAACACAAAGCCTCAAGATGCAACAACTGCAGAGAAAAAGCCTGAAGAAGCTCAGCTCGTGATTTTGGATTCAAAAGAGAAGATGGAGCTTTACCGGAACAAAATGCAGGAGCTGGTTCTATATAAAAGCAGATGTGATAATCGATTAAATGAGATAACGGAAAGGGCATCTGCGGATAAGCGGGAGGCAGAATCATTGGGCAAGAAATATGAAGAGAAATACAAACAAGTAGCCGAAATAGCATCAAAATTGACTGTTGAAGAAGCTAAATTTCGTGATATACAGGAAAGGAAGGTGGAACTGCAGCAAGCCATTGTCAAAATTGAACAAGGAGGCAGTGCAGATGGCATTCTTCAGGTCCGTGCTGAACGCATACAGTCAGATCTTGAGGAATTATTTAAGGCTCTAGCTGATCGGTGCAAGAAACATGGGATAGATGTGAAGTCAATTACAATGGTTCAGCTTCCTGCTGGTTGGCAACCTGGAATTCCAGAGGGAGCTGCACTTTGGGATGAAGATTGGGATAAATTTGAGGATGAAGGATTTGCCAATGATCTTACTTTTGACCCCAAAAATGCATCTTCAAAACCAAAGCCCGTATTTATTGACGGAGAACAAAATTTCTCTGATGATAATTCTATTCACGGTTCACCTATGAAAGCAAATGGGAAGCAAGAAAATTCTGCTAACGGTGATTATACAGTTGAGGATTACGCACATAGTGAAGAAGACCTGGCTAGAAGCCCCCACGATAGTCTAGCTGGGAGGAGTACCTTGGAGAGTCCTTCTCAAGACTTCTCAAATGCTCACTTTGGAAAAGGTTCTGAAACAGATGCAGAAACACACAGAAGTTTTGACGAATCGACCTGGGGTGCATTTGACAACAATGATGACGTGGACTCAGTGTGGGGTTTCAAGACCAAGGACTCTGACTTCGAGCAGGGAGATTTCTTCAAATCTGATGATTTTGGTATAAACCCCATCAGAACAGGATCTACACATACGGATAACACGTTCCAGACAAAAAGCCCATTTACTTTTGATGATTCAGTGCCTGCAACTCCAGTTTCCAAGTTCGAAAATTCTCCCAGGTACAGTGAGGCGGGGGATCATTTCTTTGACACGTCAAGGTTTGATTCCTTCAGGCACGAAAGTGGATATTCTCCACAGCCAGAGAGGCTTACGAGATTTGATTCCATAAGTAGCAGTAAGGATTTTGGCTTTGGCAATGATAATAAATTCACAAGGTTTGATTCCATAAGTAGCAGTAAGGATTTCGGCTTTGGTAATGATAAATTCACAAGGTTTGATTCCATAAGTAGCAGCAAAGATTTTGGCAACAGTAATGATAAATTCACAAGGTTTGACTCCATAAGTGGCAGCAAGGATTTTGGTTACAATCCTGAGAAGCTCCAAAGGTTTGATTCCATGAATAGCAGCAATGATTTCGGTTTCGGTCAACAAGGGCATGCAAGGTTTGACTCAATAAGTAGCACCAGTGGTCCATTCTCATTCGATGACTCTGATCCATTTGGCTCCTCTGCCCCTTTTAAGGTCTCTTCAGAAAACCATTCTCCGAAAAAGGGTTCAGATAACTGGAGTGCATTCTAG 3285 0.4527 MAAPNMDQFEAYFRRADLDGDGRISGVEAVSFFMGSNLPKQVLAQVWAYADQAKTGFLGRAEFFNALRLVTVAQSKRDLTPDIVKAALYGPAAAKIPAPQINLASVPQPVPNARPHAGSVGQMGVTAPNSAQGFAYRGQGLAGPGANPQYYPSQQNPAIRPHQSMPVSGAPHLQQGVAGPDISRGVNMGGHNFSNPGLSNDWNKARPGMVATRPAGMNPSAALQTSQSPVSPMPQSSPVSPMPQLSPVSPMPQSTTVHTKALGVSGNGFSSNPALGNDFFSAASSTPKQEPAGHSYSVSNVSSAIVPVSTGPQPANKQNSLDSLQSAFSSVLPANSQFQRPQSAPNQQIKPQASSSPHTPSGMTGGVGNANSDNVQLSWPKMKPTDVQKYTKVFLEVDTDRDGKITGEQARSLFLSWRLPIEVLKKVWDLSDQDNDSMLSLKEFCFALYLMERYREGRPLPQSLPSNVMFDETLMSMTGQPKNAPGNAAWGINQGFQQQQQGMPGARPVAPTAGFRPPVHGSSAQADFTTQPNQQKSGTPVLEESFLNRTDSGEQNASNTKPQDATTAEKKPEEAQLVILDSKEKMELYRNKMQELVLYKSRCDNRLNEITERASADKREAESLGKKYEEKYKQVAEIASKLTVEEAKFRDIQERKVELQQAIVKIEQGGSADGILQVRAERIQSDLEELFKALADRCKKHGIDVKSITMVQLPAGWQPGIPEGAALWDEDWDKFEDEGFANDLTFDPKNASSKPKPVFIDGEQNFSDDNSIHGSPMKANGKQENSANGDYTVEDYAHSEEDLARSPHDSLAGRSTLESPSQDFSNAHFGKGSETDAETHRSFDESTWGAFDNNDDVDSVWGFKTKDSDFEQGDFFKSDDFGINPIRTGSTHTDNTFQTKSPFTFDDSVPATPVSKFENSPRYSEAGDHFFDTSRFDSFRHESGYSPQPERLTRFDSISSSKDFGFGNDNKFTRFDSISSSKDFGFGNDKFTRFDSISSSKDFGNSNDKFTRFDSISGSKDFGYNPEKLQRFDSMNSSNDFGFGQQGHARFDSISSTSGPFSFDDSDPFGSSAPFKVSSENHSPKKGSDNWSAF 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03767 1094 MobiDBLite consensus disorder prediction 1030 1056 - -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 740 849 - -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 794 808 - -
Viun9g03767 1094 Pfam Cytoskeletal-regulatory complex EF hand 380 465 IPR000261 GO:0005515
Viun9g03767 1094 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Viun9g03767 1094 SMART eh_3 1 93 IPR000261 GO:0005515
Viun9g03767 1094 SMART eh_3 379 474 IPR000261 GO:0005515
Viun9g03767 1094 MobiDBLite consensus disorder prediction 218 233 - -
Viun9g03767 1094 CDD EH 390 456 IPR000261 GO:0005515
Viun9g03767 1094 Gene3D - 380 469 - -
Viun9g03767 1094 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Viun9g03767 1094 Pfam EF hand 10 25 IPR002048 GO:0005509
Viun9g03767 1094 MobiDBLite consensus disorder prediction 497 575 - -
Viun9g03767 1094 SUPERFAMILY EF-hand 5 84 IPR011992 -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 234 248 - -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 764 792 - -
Viun9g03767 1094 SUPERFAMILY EF-hand 374 469 IPR011992 -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 145 255 - -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 1074 1094 - -
Viun9g03767 1094 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Viun9g03767 1094 Gene3D - 3 95 - -
Viun9g03767 1094 SMART efh_1 42 70 IPR002048 GO:0005509
Viun9g03767 1094 SMART efh_1 423 451 IPR002048 GO:0005509
Viun9g03767 1094 SMART efh_1 389 417 IPR002048 GO:0005509
Viun9g03767 1094 SMART efh_1 8 36 IPR002048 GO:0005509
Viun9g03767 1094 PANTHER EH DOMAIN 3 957 - -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 148 162 - -
Viun9g03767 1094 Coils Coil 642 662 - -
Viun9g03767 1094 MobiDBLite consensus disorder prediction 812 829 - -
Viun9g03767 1094 CDD EH 9 75 IPR000261 GO:0005515
Viun9g03767 1094 MobiDBLite consensus disorder prediction 523 565 - -
Viun9g03767 1094 ProSiteProfiles EH domain profile. 386 469 IPR000261 GO:0005515
Viun9g03767 1094 MobiDBLite consensus disorder prediction 336 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03767 Viun-Chr9 42640229 42651052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03767 1 121 EF-hand Containing Proteins AT1G20760 27.481 7.32e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03767 K12472 - gmx:100784075 1787.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03767 9 42640229 42651052 Viun9g03767 9 42640229 42651052 ECH