Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03762 ATGGGCGAGGTATCTGAAACGATGACGAAGAAGAAGAAGAAGGGACGACCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAGAAGGAACAGCAACAGAACCACCACCACAACCACCGACAAAACAACCCCAATTCCACAAATTCACACTCAAAAAACACCAACGTTGCTGCTACCCACGACGACGACGACGACGAGAGAAAGGAGAAGAAGCACAAGCTACTAGTCGGGCTCAATTCACATCTCCAACACCCGACATTATTCCCCAATTCACAGCCAGTCAATTCCGATCCCAAGAGGCGCAAGATTGACCCGCTACACAACCACCAAACGGATGGGAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGGGGAGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAAAAGGACACACACGGGGTGTTCTCCGAGCCTGTGGATCCTGAAGAGCTTCCTGATTATCATGACATCATTAAGCACCCGATGGATTTTGGAACTGTGAGAAAGAAATTGGATGAGGGACTGTATACCGACTTGGAAGATTTTGAGAAAGATGTGTTCTTGATTTGCTCTAATGCAATGCAATATAATTCATCAGATACCATTTACCATCGACAGGCCCGAGCCATGCAAGATATCGCAAGGAAGGACTTTGAGAATCTTAGACAAGATAGTGATGATAGTGAACCGCAGCCCAAAGTTGTGCAGAGAGGAAGGCCACCAGGCAAGCCCTCAAGAAAGTCACTGGGTATGCCTCCTGCTGAGCGCGTTGGTCCTGAATCTTCTTCTGATGCAACTCTTGCTTCTGGCGGGGACATTGCTAGTGGCTCCAACGGTTATAATCTTAGGAAAGGACCAAGCAAATTTCAGCCTACAGATTCATCTACTAGGGCCTACAACAACACTTTTAACAGTGGAGGGTATAGTGGCTGGCCTGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCTGTGTTAAGATATGGAAAGAAGCAGTTTGCAGTTGATGAGACCAGGCGCGATTCTTACAAAATACCAGTGACTTCAGGAAATGAAGGACCGCTGTTGACCACAGTTGAAGATGAAGTCAAACAGCTTCTTGCTGTAGGTATACACATGAAGCATAGTTATGCAAGAAGTCTAGCCCATTTTGCTGCAGACCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGTAAAATCAGCAGTGTTTTGCCTACAGGACATGAATTTGGTCCTGGATGGGTAAGTGAAGAAGACGGGTCACAGAAACAACACTTCCCAGTTTGTGATGAGGGTAGAACTTCAGACCCTCCCGTAGTAGAGGATTGTAAAAGTAGATTTTCTTCTCCATCTGGATCACTTCTTCCCCTTGCAAATAGACCCTGCTTGCAAAGTGTTGACATGGTTATAAATAATTATCAAAAAGAATTGAATCCGGCAATCAACATTGCTGGTGGATCTGAGTCCATAACTCCTGTGAAGATTCAGCAGGAATCCATGCCGCACTCTGATGATATTGGCTCACATGATTGGTTAGGTTATAATTTTTCACCACAAATGAAGATGGTAAAACTTGCTGACCTAACTGGGTCTCCGAGTGCTGGGGTTGCTCCTCCAATGGATCCCATAAGCAACCGCATTGCGCAGACAAATACTAATCCTTCTCTTATGGGACAGTATGGGAGCAAATCAAGTCAACTAGAATCTGGTAATTTATTGGCCCGAGAATCTGTGTTTGAGCCACGAAGTTGGTCTCAAGGAATTGCTGGAAAATCATCTTGGCAGGGTTTGGAAGTTCCCACTAAACAGAAGTCTTTTGCACTTTCTAATGACTTGAATGGAAGGATTGGAACTACAAATTCACCCAGTAGTTCCAATGTGGAGGCTGGTTCTCAGTTGCAGCCTAATTTGGCATTACAGCTCTGA 1974 0.4524 MGEVSETMTKKKKKGRPSLLDLQKRSLKKEQQQNHHHNHRQNNPNSTNSHSKNTNVAATHDDDDDERKEKKHKLLVGLNSHLQHPTLFPNSQPVNSDPKRRKIDPLHNHQTDGKVPKATDSKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTVRKKLDEGLYTDLEDFEKDVFLICSNAMQYNSSDTIYHRQARAMQDIARKDFENLRQDSDDSEPQPKVVQRGRPPGKPSRKSLGMPPAERVGPESSSDATLASGGDIASGSNGYNLRKGPSKFQPTDSSTRAYNNTFNSGGYSGWPEWENEFPASVVKAVLRYGKKQFAVDETRRDSYKIPVTSGNEGPLLTTVEDEVKQLLAVGIHMKHSYARSLAHFAADLGPVVWKIAASKISSVLPTGHEFGPGWVSEEDGSQKQHFPVCDEGRTSDPPVVEDCKSRFSSPSGSLLPLANRPCLQSVDMVINNYQKELNPAINIAGGSESITPVKIQQESMPHSDDIGSHDWLGYNFSPQMKMVKLADLTGSPSAGVAPPMDPISNRIAQTNTNPSLMGQYGSKSSQLESGNLLARESVFEPRSWSQGIAGKSSWQGLEVPTKQKSFALSNDLNGRIGTTNSPSSSNVEAGSQLQPNLALQL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03762 657 MobiDBLite consensus disorder prediction 236 315 - -
Viun9g03762 657 CDD Bromodomain 137 233 - -
Viun9g03762 657 MobiDBLite consensus disorder prediction 38 55 - -
Viun9g03762 657 MobiDBLite consensus disorder prediction 277 315 - -
Viun9g03762 657 MobiDBLite consensus disorder prediction 1 29 - -
Viun9g03762 657 ProSiteProfiles Bromodomain profile. 149 219 IPR001487 GO:0005515
Viun9g03762 657 PRINTS Bromodomain signature 182 200 IPR001487 GO:0005515
Viun9g03762 657 PRINTS Bromodomain signature 166 182 IPR001487 GO:0005515
Viun9g03762 657 PRINTS Bromodomain signature 200 219 IPR001487 GO:0005515
Viun9g03762 657 PRINTS Bromodomain signature 152 165 IPR001487 GO:0005515
Viun9g03762 657 SUPERFAMILY Bromodomain 119 242 IPR036427 GO:0005515
Viun9g03762 657 MobiDBLite consensus disorder prediction 56 76 - -
Viun9g03762 657 Pfam Bromodomain 144 223 IPR001487 GO:0005515
Viun9g03762 657 ProSitePatterns Bromodomain signature. 154 211 IPR018359 -
Viun9g03762 657 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 656 - -
Viun9g03762 657 Gene3D - 135 252 IPR036427 GO:0005515
Viun9g03762 657 MobiDBLite consensus disorder prediction 97 121 - -
Viun9g03762 657 SMART bromo_6 130 238 IPR001487 GO:0005515
Viun9g03762 657 MobiDBLite consensus disorder prediction 627 657 - -
Viun9g03762 657 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03762 Viun-Chr9 42591058 42595531 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03762 K22184 - gmx:100811115 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03762 9 42591058 42595531 Viun9g03762 9 42591058 42595531 ECH