Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03743 ATGCAAGCTGCATCAACAGGCATTGGTTACGGTCTCAAATATCAGGCCAGATGCATATCAGATGTAAAAGCAGACACAGATCACACTAGTTTTCTTGCAGGAACTCTCAGCCTCAAAGAAGAAAACGAGGTACATCTGATTCGGCTCTCGTCCAGTGGAACCGAACTCTTCTGCGAGGGATTGTTTTCTCATCCCAACGAGATCTGGGACCTCGTCTCTTGTCCGTTTGATCAACGGATCTTTTCAACCGTTTACTCTAATGGTGAAACGTGTGGGGCAGCGATATGGCAGATACCTGAGTTATACGGCGAATTAAATTCCCCGCAGCTTGAGAAAATTACATCCCTTGACACTGATTCTGGGAAGATTAAATGTATTCTTTGGTGGCCATCTGGACGTCATGATAAACTGATCAGCATCAATGAGGAAAATATGTACTTGTGGAATTTAGATGTTTCAAAGAAAACTGCACAGGTACAATCACAAGATTCAGCTGGTATGCTGCACAAATTATCTGGAGGGGCGTGGGATCCTCATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCATATCTCCAATTATGGGATGTCAGAACAATGAAGAAGACTATTTCAGTGGAATGTTCTCATGCATGCAGTGTTGATTACCATCCTCAGAAGCAGCACATACTTGTTACTGCTGAGCATGAGTCTGGGATACATATTTGGGATCTAAGAAAACCCAAACTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGACGTGGACTGTCAAGTGTAATCCAGAGTATGATGGAATGATCTTGAGTAGTGGTACGGATTCAACTGTCAATTTGTGGCTTACCTCAACTAATCATGACGAGCTAACAACTGAAAGACTAGTAGATTCATCTGCCCGATGGGTTGATCCGTTGCTTAATTCATACAGTGATTATGAAGATAGCATTTATGGGCTCACATGGAGCTCCCGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTAGAATCAGTTAAGCCTTACATACCCAAAAAATGA 1053 0.4283 MQAASTGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETCGAAIWQIPELYGELNSPQLEKITSLDTDSGKIKCILWWPSGRHDKLISINEENMYLWNLDVSKKTAQVQSQDSAGMLHKLSGGAWDPHDVSSVAATCESYLQLWDVRTMKKTISVECSHACSVDYHPQKQHILVTAEHESGIHIWDLRKPKLPIQELPGHTHWTWTVKCNPEYDGMILSSGTDSTVNLWLTSTNHDELTTERLVDSSARWVDPLLNSYSDYEDSIYGLTWSSREPWIFASLSYDGRVVVESVKPYIPKK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03743 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 280 IPR001680 GO:0005515
Viun9g03743 350 SMART WD40_4 55 97 IPR001680 GO:0005515
Viun9g03743 350 SMART WD40_4 241 281 IPR001680 GO:0005515
Viun9g03743 350 SMART WD40_4 197 237 IPR001680 GO:0005515
Viun9g03743 350 SMART WD40_4 109 149 IPR001680 GO:0005515
Viun9g03743 350 SMART WD40_4 302 342 IPR001680 GO:0005515
Viun9g03743 350 PANTHER WD-REPEAT PROTEIN 1 348 IPR040323 -
Viun9g03743 350 FunFam WD repeat-containing protein DWA2 14 346 - -
Viun9g03743 350 SUPERFAMILY WD40 repeat-like 18 340 IPR036322 GO:0005515
Viun9g03743 350 Gene3D - 14 348 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03743 Viun-Chr9 42451377 42456953 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03743 K23289 - gmx:100779030 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03743 9 42451377 42456953 Viun9g03743 9 42451377 42456953 ECH