Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03708 ATGAGAGCGGAGATGAAGGAAGAAACTCAAGCCCTGGTAAATGATAATTCTAACTGCGGCAAATTCTCGCAACTCCTTGCTTCCCAAGATCGTGATTATCTTCTTTCTCCAACTGGGGTTCAGGTGAAGGTCTGTGATCTTGAAGGGAAAGTAGTGGGTCTATTATTCGGTGCGAATTGGTACCCACCATGCCGCGTATTCACCCAAGTCCTAGTTGGAATCTACGAGGACTTGAAAAGCCGTTTCCCTCAGTTTGAGATTGTGTACGTGTCCTCTGACGAAGACTTGGATGCTTTCAGTAGCTTCTATGGGAACATGCCATGGCTAGCGATACCGTTCTCCGATTTGGAAACAAAGAAATGGTTGACCAGAAAGTACGAGGTGGAAGGCATTCCGTGCTTGATTTTGTTGCAACCAGAGGATGGTAAAGATGAGGGAACAGTTCGTGATGGGGTTGAACTTGTTTACCGTTACGGAGCCGAAGCTTACCCATTCTGTAACGAGAGGTTGGAGCAGCTGCGAAAAGAGGACAAAGTGAAGCGTGAAAATCAAACCCTCGTTAATTTGTTGTCAAACCAGCATAGAGACTATGTTTTGAGTCACACTCACTCTGGACTTAAACAGGTACCTGTTGCTTCTCTAGTGGGTAAAACAATTGCACTCTACTTCTCCGCGGAGTGGTGCGTGCCATGCGCCAAGTTCACTCCCAAACTGATTTCCGTTTACGAGAAGATTAAGCAGGAGCTAGCGGAGAAGGGAGAGGAAGACTTCGAAGTTGTGCTGGTATCCAGCGACCGTGACAGAGCATCGTTTGAGTCATACTACAGCAGCATGCCTTGGTTAGCCTTGCCTTTCGGAGACTCCGAGACGAAGAACCTCGTTCGACACTTCAACGTGCAAGGGATTCCATGGTTGGTGATCATAGGTCCTGATGGTAAAACAATAACAGTGCATGGTAGGAGCTTGATAAACTTGTACCAAGAGAACGCGTACCCTTTCACGAACGCCAAAGTGGAGGAGCTGGAAAAGCAGCTTGAGGAAGAGGCCAAGGATCTTCCGGCACTGGTTTATCACGAAGGGCATCGACATGACCTGAATTTGGTGTCTGATGGGAACGGTGGAGGACCCTTTATCTGCTGTGTGTGCGATGAACAAGGGTCTAGTTGGGCCTACCAGTGTCTCCAATGTGGTTATGAAGTGCACCCCAAATGCGTCAGAACAGTGGAACGTCAGAACAGTGTGTTAATAACTAATTAA 1257 0.4757 MRAEMKEETQALVNDNSNCGKFSQLLASQDRDYLLSPTGVQVKVCDLEGKVVGLLFGANWYPPCRVFTQVLVGIYEDLKSRFPQFEIVYVSSDEDLDAFSSFYGNMPWLAIPFSDLETKKWLTRKYEVEGIPCLILLQPEDGKDEGTVRDGVELVYRYGAEAYPFCNERLEQLRKEDKVKRENQTLVNLLSNQHRDYVLSHTHSGLKQVPVASLVGKTIALYFSAEWCVPCAKFTPKLISVYEKIKQELAEKGEEDFEVVLVSSDRDRASFESYYSSMPWLALPFGDSETKNLVRHFNVQGIPWLVIIGPDGKTITVHGRSLINLYQENAYPFTNAKVEELEKQLEEEAKDLPALVYHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVRTVERQNSVLITN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03708 418 ProSiteProfiles Thioredoxin domain profile. 188 350 IPR013766 -
Viun9g03708 418 PANTHER THIOREDOXIN 18 389 - -
Viun9g03708 418 Pfam Thioredoxin-like 49 142 IPR012336 -
Viun9g03708 418 Pfam Thioredoxin-like 216 313 IPR012336 -
Viun9g03708 418 SUPERFAMILY Cysteine-rich domain 349 406 IPR046349 -
Viun9g03708 418 ProSiteProfiles Thioredoxin domain profile. 24 175 IPR013766 -
Viun9g03708 418 Coils Coil 331 351 - -
Viun9g03708 418 SUPERFAMILY Thioredoxin-like 197 318 IPR036249 -
Viun9g03708 418 Gene3D Glutaredoxin 25 166 - -
Viun9g03708 418 SUPERFAMILY Thioredoxin-like 35 140 IPR036249 -
Viun9g03708 418 Gene3D Glutaredoxin 198 337 - -
Viun9g03708 418 CDD C1 379 408 - -
Viun9g03708 418 Pfam C1 domain 360 405 IPR004146 -
Viun9g03708 418 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 360 412 IPR002219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03708 Viun-Chr9 42256895 42261661 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03708 K17609 - gmx:100815038 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03708 9 42256895 42261661 Viun9g03708 9 42256895 42261661 ECH