Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03683 ATGGATCAGCTCAAACTATCACTTCAATTTTTACTAACACTTCATCTATTAGCATCAGGTGCAGTATCAACCACAACCTTCACCGTGGTTAACAAATGCGACTATTCAGTGTGGCCAGGCATTCTCTCAAACGCAGGAATCGCGGCGCTTCCAACAACCGGTTTCCTTCTACAAACCGGAGAGGCCAAAACCATCACCGCTCCAACCTCTTGGGGTGGCCGTTTATGGGGCCGCACTCTCTGCACGCAAGACTCCGCTGGAAAATTCTCCTGCCTCACGGGCGATTGTGGCTCCGGCACGATCGAATGTGCGGGCAACGGTGCCTCGCCGCCAGCGACCTTGGCCGAGTTCACACTCAACGGTGACAGAGGTCTTGATTTCTTCGACGTGAGCCTAGTGGACGGTTACAACGTTCCGATGCTGGTGACTCCTCGTGGTGGCTCCGGTGATAACTGCACCAGCACGGGGTGCGTTGGGGACCTCAACGGCACGTGCCCTTCGGAGCTTAGGGTTACAAGCGTGGATGGAAAACAGAGCATGGCGTGTAGGAGTGCGTGTCAGGCGTTCGGGTCCCCGCAGTATTGCTGCAAAGGCGTGTATGGGTCTCCCAACACTTGCAAGCCTACGGCATATTCGCAGATTTTCAAGAGCGCTTGCCCACGCGCGTACAGCTACGCGTATGATGACAAGACCAGCACTTTTACATGTGCACCCTCTGCGGATTACACCATCACTTTCTGCCCTTCCCCTAATGATAACCCCAGTCAGAAATCGTGGCAGGGGCAAAACCCGAGATCAGATAGCAGTGGTTCTTCTTCTGGGTCGCCGCAACTTAACAATGGCACAATGGTGTATGTAGGAGGTGCCATGGATCAAAGTGAATTATCATGGTCAGCAGGTACACATGTGAAGGAATCTCAAGCCATTGCTGGTTTTGTCAGTATCACCATTGCTCTTTGGCTCTTGTGCCACTTATAG 978 0.5297 MDQLKLSLQFLLTLHLLASGAVSTTTFTVVNKCDYSVWPGILSNAGIAALPTTGFLLQTGEAKTITAPTSWGGRLWGRTLCTQDSAGKFSCLTGDCGSGTIECAGNGASPPATLAEFTLNGDRGLDFFDVSLVDGYNVPMLVTPRGGSGDNCTSTGCVGDLNGTCPSELRVTSVDGKQSMACRSACQAFGSPQYCCKGVYGSPNTCKPTAYSQIFKSACPRAYSYAYDDKTSTFTCAPSADYTITFCPSPNDNPSQKSWQGQNPRSDSSGSSSGSPQLNNGTMVYVGGAMDQSELSWSAGTHVKESQAIAGFVSITIALWLLCHL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03683 325 Gene3D Thaumatin 25 248 IPR037176 -
Viun9g03683 325 CDD TLP-PA 26 247 - -
Viun9g03683 325 SMART tha2 27 248 IPR001938 -
Viun9g03683 325 MobiDBLite consensus disorder prediction 252 278 - -
Viun9g03683 325 Pfam Thaumatin family 31 248 IPR001938 -
Viun9g03683 325 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Viun9g03683 325 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Viun9g03683 325 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Viun9g03683 325 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Viun9g03683 325 PANTHER OS03G0233200 PROTEIN 17 248 IPR001938 -
Viun9g03683 325 FunFam THAUMATIN-LIKE PROTEIN 1 25 248 - -
Viun9g03683 325 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Viun9g03683 325 SUPERFAMILY Osmotin, thaumatin-like protein 25 249 IPR037176 -
Viun9g03683 325 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03683 Viun-Chr9 42074483 42077029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03683 1 260 Receptor kinase-like Gene Family AT5G38280 53.435 3.55e-96 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03683 - - gmx:100780102 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03683 9 42074483 42077029 Viun9g03683 9 42074483 42077029 ECH