Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03661 ATGGGAGAAAAATCAAAGTCCAAAGGAGGGTGTTGCGGTTGGTTCATCGCATTTGTCATTCTGGCCATCGTCGTCGGCGCTATTGTTTTTACGGTCATGAAGAAATTCGGTCACTCCGGTTCTGATAAAGCTCCCGGTCCCCCTGGCGCCGTTGATCAAAAATATGCCACTGCACTAAAAACCTCACTGCAATTTTTCGATATTCAAAAATCTGGGAAGTTAGTCAACAACAAAATACCTTGGAGAGGGGATTCGGGTCTTAAGGATGGGAGCCAAGCGAAGCTGGATCTCACAAAAGGAATGTATGATGCTGGGGATCACATAAAATTTGGTTTTCCGTTGGCATTTACGGCGACGGTGTTGTCGTGGGCCATTCTGGAATATGGAGATCAAATGGATCACGTTGGCCAGTTAGATTCGGCTCAAGATTCGCTCAAGTGGATCACTGATTATCTCATCAATGCTCACCCTTCTGCTGATGTTCTTTACATTCAGGTGGGTGATCCTGTTGCAGATCACAAGTGTTGGGAAAGACCAGAAGACATGACTGGAGCTCGACCGCTCATACAAGTGAATGCATCTTATCCTGGATCAGACGTTGCAGCTGAAACTGCAGCTGCCATGGCCTCAGCATCTTTGGTCTTTAAAAAGTCTGATTCTTCGTATTCAAGCACACTCCTCAAGCATGCAAAAGAGTTGTTCACTTTTGCTGACAAAAATAGGGGATATTATAGTGAGAGTATACCTGAAGTTCAGACATATTATAACTCAACTGGCTATGGTGATGAGCTTTTATGGGCTGCTAGCTGGCTCTATCATGCTACGGGTGATGACTCTTACCTTGAGTTTGTGACTGGCCAAGATGGAGAAGACTATGCTGAATGGGGAAGCCCAACCTGGTTCTGTTGGGATAACAAGCTTGCTGGAACTCAGGTTTTGTTGGCTAGATTAAGCTTTTTCAAAGCAAAGGACATTTCAAATTCGTATGGCTCTGGGCTCCAAAGTTACAGGAAAACAGCTGAGGCTGTAATGTGTAGCCTTCTTCCGGATTCTCCAACAGCCACACAAAGCAGAACAGATGATGGTCTTGTATGGGTGAGCGAATGGGACTCTTTGCAACATCCTGTTGCATCTGCATTCTTAGCTGTTATTTACAGTGACTATATGCGAACATCGCAGACACCAAAACTACATTGTGATTCAGATTCCTTTACTGCATCAGATCTTCGAGACTTTGCCAAATCTCAGGCTGATTACGTGTTGGGCAAGAATCCTATGGATACGAGTTTTCTGGTGGGTTACGGCGATAAATTCCCGCAATTCGTGCATCATAGGGGTGCTTCAATTCCTGCCGATGCAAAAGCTAGCTGCAAGGATGGATTCCAGTGGCTTGAATCATCTGATCCAAATCCCAATGTTGCTACTGGAGCCCTTGTTGGTGGACCCTTCAAGAATGAGACTTTCATTGATTCCAGGAACAATACCATGCAAACAGAACCAAGCACGTACAATAGTGCTGTCATAGTCGGTCTCCTATCAAGTTTAGTCACCACGTCTTCTGTTGTTCAATCCTTTACCTAA 1581 0.4491 MGEKSKSKGGCCGWFIAFVILAIVVGAIVFTVMKKFGHSGSDKAPGPPGAVDQKYATALKTSLQFFDIQKSGKLVNNKIPWRGDSGLKDGSQAKLDLTKGMYDAGDHIKFGFPLAFTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLINAHPSADVLYIQVGDPVADHKCWERPEDMTGARPLIQVNASYPGSDVAAETAAAMASASLVFKKSDSSYSSTLLKHAKELFTFADKNRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAEWGSPTWFCWDNKLAGTQVLLARLSFFKAKDISNSYGSGLQSYRKTAEAVMCSLLPDSPTATQSRTDDGLVWVSEWDSLQHPVASAFLAVIYSDYMRTSQTPKLHCDSDSFTASDLRDFAKSQADYVLGKNPMDTSFLVGYGDKFPQFVHHRGASIPADAKASCKDGFQWLESSDPNPNVATGALVGGPFKNETFIDSRNNTMQTEPSTYNSAVIVGLLSSLVTTSSVVQSFT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03661 526 SUPERFAMILY Six-hairpin glycosidases 53 517 IPR008928 GO:0005975
Viun9g03661 526 Pfam Glycosyl hydrolase family 9 55 512 IPR001701 GO:0004553|GO:0005975
Viun9g03661 526 Gene3D - 52 519 IPR012341 GO:0005975
Viun9g03661 526 PANTHER ENDO-1,4-BETA-GLUCANASE 26 517 - -
Viun9g03661 526 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 419 445 IPR018221 -
Viun9g03661 526 FunFam Endoglucanase 51 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03661 Viun-Chr9 41981343 41988742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03661 1 525 Glycoside Hydrolase AT1G75680 69.565 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03661 - - gmx:100820195 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03661 9 41981343 41988742 Viun9g03661 9 41981343 41988742 ECH