Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03635 ATGGGAGCCCTGGCTACATTAGCCCCTTGGATTCCCGAGGACGATCTTTTGCTCAAGAACGCCGTTGAGGCCGGTGCTTCACTAGAGTCACTTGCCAAAGGTGCAGTGCAATTTTCTCGGAAATATAACATCAGAGAGATACAAGATAGGTGGTATTCTCTCCTATATGATCCTGTCATTTCTGCCGAAGCTTCTGCGGGTATGACAAACTTTGAGCTTTCAGCTTCGCCTCTCCCGTCCAAGTTTTACAGGTTTGGACATTCCAAGGAACAGAAAGTTGTTTCAACTAAGAGAAAGTCTGGAAGTGTTCGCAATTTGTATTATGCAAGACTCAAAAGAATTCGCAATAGCATGTTAACTTCCATGGACTTGAGTTTTCTAGTTGATCCAGGAAATGGTAATTATGCAGAACATGAAAGTCACCCCTTATCTGGAACCTGCATGCCTGAAGGTGGAACTTTAAATCTCCCTGTTCAGTATGATTTTCCTCCTGAAAATGTGATGGATGATAATGTGGTTTCTAATGGAGTTCCTGCCAGTGTGTTTTTCCCGGGAATTGAAAGTGCAGTTGAAGAGAATTTGCCTGTCCAGCTAAATAATGTACTTAAGGAAGAACCTCAATTTATTGGAGACAACGTGCCTTTGGATGAAGCTGTTGAGGAATTGGATATTCCTGGAGAATTGACTATTGATGGGTGGATTGGTGACGATAATTTAGGGAGAATACCTTTGCCCACATTGGATGACATCAACAATGACCCTGGAAATATGTGTCCTGATTTTGATGAAAAAAACGCATTTGATTCAACTGAGTTAGAGTGTGGAACATCATTTAACTTAGCTTCACTTCCTGAAATACCAGTCTGGAGTACAGATGAGGGCATCAAAGAGTCTGATTTGCCATGCGATGGTTTTAATGATTCGATTGCTTGTGGGGAGGCTTATTTGGAAGAACTGTCCAATTCTCTCCTGAACTTCAGTAGTGAGGAAGAGCTCTTTCTGATGGATGTTGATGGAGAAGAAGGGATTGACAAATCTTACTTTGATGGTCTGAGTTCGCTCCTACTAAATTCTACAAATGATGTTAATCCAAGTCAAGTCCCTAAAAAGGATGAAGCAGAGCTGCAAGTCCCTAAAACAGATGGAACAGAGTCGTTAACGGCCTCACAGGCACATGTTCTAAATCAGTCAGTTTCATGTCACAAAGAGTTAGAAGACAACCCAGGGTCAACCTCTAGTGGTGTACAAGTAGTTCACAAATTAGAATTCCAAATGTCATCTCCTCCCTTGGCTGAAGATCCCCTCTTTCATGAACTAACTAATGAATTTCCTTTCTGTTCGCTAAACACTGAGGAACAAGAAATTCCAGATAACGAAGACGTTTTCCTACCATTTGATGTGCCTCCTGTCATATTTCCCCCTTCATCTAAACTGATTTTTAAAGCATCCAAAAAACGAATTTCATCATCTGTTCAGGATTATGGATTTAATAGACATAGAGCCAACGAAAGAGGTAAATCTTTGATGCATGCAGAGAAGAAAATCCGTGTAGAATCTCAATCATCTTCTCAGATGATGGGATCTCCTAGCTTCCTTGTACCTGATGGTGGTTCTAAGGTAAAATGCGAGTTGCCTGCTAGTCATGCATCACGCATAGTATCTACGACTTCTGTTACTGTTTCTGGTAGCTTAGGTGGAAATGATGCTGCAAACACTACAAATGCTCTTCTGCGTGCAAATAGAAAGGAAGAAGCTACCAACGCTGACTTGGCAAAGGATCAATGCGATCATATATCAAATCTTTTCATTAAGAAATCAGCAGCTAGTTCTAACGACTTACGAAATAATCCCCAACTTCATGGTTCTGCCATGAAGAATGAGCAAGATTTAGGTTTGTCACTTCAAAATCACCAGTTGAAAGTTGCTGAAGTTGGATCCTCAGATATTCTTGAGTCAGAGCTGGTAGCAGACCCTCTAACACTAGATGAGGAAGAGCATGATATAGAGAGCGACGATGAGCTTCCTTCTTATTCTGACGTAGAAGCAATGGTACTTGATATGGACTTGGATCCTGATGATCATCAGGATTCTTGTTATAGTGAGGAAGTATCAAGATATCAACATGTGGAAAGTAAGCGAGCTATCATGAGGCTGGAACAGGGTGCCCATTCTTGTATTCAGAGAGCCATTAATGCACATGGAGCATTTGCCATTTTATATGGTCGCCACACAAAGCATTATATTAAGAAACCCGAGGTTCTACTTGGTCGAGCGACGGAAGGTTTTCCTGTGGACATTGACTTGAGTAAAGGAGGGTATAGCAATTCAATATCTCGACGTCAGGCAATTATCAAGATGGATAAGGAGGGGTCATTCTACATCAAAAACTTTGGCAAGAGTTCAATTCTGGTAAATAGCAAAGAAGTGCACACTGGTCAGTCTCAAAGACTGCATACCAATTATCTAATTGAGGTGAGGGGCATACCTTTGATATTTGAGATAAATCAAAATCGTGTGAAGCGGTACCTGGATCACATTTCTGACAATTCACAAACCTTTTAG 2562 0.4118 MGALATLAPWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYNIREIQDRWYSLLYDPVISAEASAGMTNFELSASPLPSKFYRFGHSKEQKVVSTKRKSGSVRNLYYARLKRIRNSMLTSMDLSFLVDPGNGNYAEHESHPLSGTCMPEGGTLNLPVQYDFPPENVMDDNVVSNGVPASVFFPGIESAVEENLPVQLNNVLKEEPQFIGDNVPLDEAVEELDIPGELTIDGWIGDDNLGRIPLPTLDDINNDPGNMCPDFDEKNAFDSTELECGTSFNLASLPEIPVWSTDEGIKESDLPCDGFNDSIACGEAYLEELSNSLLNFSSEEELFLMDVDGEEGIDKSYFDGLSSLLLNSTNDVNPSQVPKKDEAELQVPKTDGTESLTASQAHVLNQSVSCHKELEDNPGSTSSGVQVVHKLEFQMSSPPLAEDPLFHELTNEFPFCSLNTEEQEIPDNEDVFLPFDVPPVIFPPSSKLIFKASKKRISSSVQDYGFNRHRANERGKSLMHAEKKIRVESQSSSQMMGSPSFLVPDGGSKVKCELPASHASRIVSTTSVTVSGSLGGNDAANTTNALLRANRKEEATNADLAKDQCDHISNLFIKKSAASSNDLRNNPQLHGSAMKNEQDLGLSLQNHQLKVAEVGSSDILESELVADPLTLDEEEHDIESDDELPSYSDVEAMVLDMDLDPDDHQDSCYSEEVSRYQHVESKRAIMRLEQGAHSCIQRAINAHGAFAILYGRHTKHYIKKPEVLLGRATEGFPVDIDLSKGGYSNSISRRQAIIKMDKEGSFYIKNFGKSSILVNSKEVHTGQSQRLHTNYLIEVRGIPLIFEINQNRVKRYLDHISDNSQTF 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03635 853 FunFam Microspherule protein 1 696 845 - -
Viun9g03635 853 CDD FHA_MCRS1 732 835 - -
Viun9g03635 853 PANTHER MICROSPHERULE PROTEIN 1 7 851 IPR037912 GO:0002151|GO:0031011|GO:0071339
Viun9g03635 853 SMART FHA_2 752 809 IPR000253 GO:0005515
Viun9g03635 853 SUPERFAMILY SMAD/FHA domain 731 835 IPR008984 GO:0005515
Viun9g03635 853 Gene3D - 697 845 - -
Viun9g03635 853 ProSiteProfiles Forkhead-associated (FHA) domain profile. 753 809 IPR000253 GO:0005515
Viun9g03635 853 Pfam FHA domain 754 824 IPR000253 GO:0005515
Viun9g03635 853 Pfam N-terminal region of micro-spherule protein 10 74 IPR025999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03635 Viun-Chr9 41777208 41782866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03635 - - gmx:100786493 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03635 9 41777208 41782866 Viun9g03635 9 41777208 41782866 ECH