Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03621 ATGGACCTCGATCCTCGTCAATACGAAAACGTTGCTATAAATGATAATGACATCCACAGTATTGTTCTGTCATATCTTATACACAATTGCTACAAAGAATCGGTAGAATCATTCATTACTAGCACTGGGACAAAGCAGCCCGCAGATTATTTGGAGGACATGGACAAAAGGAAAAGAATCTTTCACTTTGCACTCGAGGGGAATGCACTCAAGGCTATTGAGCTTACTGAGCAGCTAGCACAGGATATTTTAGAGAAGAATAAAGATTTGCAGTTTGATCTACTAAGCCTTCATTTTGTTGAGCTTGTTTGCTCCAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAGCTGGGCCCTTTTGGAAAGGAGCCCAAATATATGGAAAAACTTGAAGATTTTATGGCCCTTCTTGCTTACAAGGAGCCAGAGAAATCCCCAATGTTTCATCTCCTTAGCTTAGAGTATCGGCAACAGGTTGCAGATAGTTTGAATCGGGCTATTCTTGCACACTTGAATCTTCCCAGATACACAGCAATGGAGAGGCTAATACAGCAGACCACAGTTGTTAGACAATGCTTAAGTCAAGAAGCGAGTAAGGATGGGCCTCCACCATTTTCTTTAAGGGATTTTCTCAAAAGTTGA 648 0.4151 MDLDPRQYENVAINDNDIHSIVLSYLIHNCYKESVESFITSTGTKQPADYLEDMDKRKRIFHFALEGNALKAIELTEQLAQDILEKNKDLQFDLLSLHFVELVCSRKCTEALEFAQTKLGPFGKEPKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADSLNRAILAHLNLPRYTAMERLIQQTTVVRQCLSQEASKDGPPPFSLRDFLKS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03621 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Viun9g03621 215 SMART Lish 14 46 IPR006594 GO:0005515
Viun9g03621 215 SMART ctlh 53 110 IPR006595 -
Viun9g03621 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 192 IPR024964 -
Viun9g03621 215 PANTHER RAN BINDING PROTEIN 9-RELATED 7 200 - -
Viun9g03621 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Viun9g03621 215 SMART toby_final6 106 201 IPR013144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03621 Viun-Chr9 41664864 41668109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03621 K23338 - gmx:100800484 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03621 9 41664864 41668109 Viun9g03621 9 41664864 41668109 ECH