Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03599 ATGGCTGTGATCCCGTGTCACTGTTACCGTATCGTCGCATCAGACAAACCCTACCTCTCCGGTCACAATCTCCGCCGTCGCTCTCCTTTCCCCTCCTCCATTTCATTCCGCCGTCGAATATCGTGCGTCGCCTCTCCCGCAGTCACTCAGAAAGTTGCGTTGAAAGATTTTCTTCACATAGATGATTTTGATAAGGACACTATTTTGAAGATGCTGGATCGGGCCATTGAGGTAAAGGCGTTGCTGAAATCAGGGGACAGGTCCTTTCGACCTTTCGAGGGGAAAACCATGTCGATGATATTTACAAAGCCGTCCATGAGAACGAGGGTTTCGTTCGAGACTGGCTTTTCATTGCTAGGCGGGCATGCCATATACTTAGGACCTAATGATATCCAAATGGGCAAGCGAGAGGAGACTCGTGACATTGCTCGTGTTCTGTGTCGCTACAATGACATCATTATGGCTCGTGTTTTTGCCCATCAGGACATACTTGATCTTGCAAAATATGCAACTGTGCCAGTCATCAATGGGTTGACGGACTACAACCATCCCTGCCAGATAATGGCTGATGCCCTTACTATGATTGAACACATTGGTCGGTTTGAAGGTACCAAGGTTGTCTACGTTGGAGATGGAAATAATATTGTTCACTCATGGCTGTTGATGGCATCTGTGATTCCATTTCACTTTGTTTGTGCCTGTCCGAAAGGATTTGAACCTGATGCAAAAACAGTTGAGAAGGCAAGGAAGGCTGGAATCAGCAAAATCGAGATAACTAATGACCCCAAAGAAGCTGTTAAAGGAGCTGATGTTGTGTATTCAGATGTCTGGGCCAGCATGGGGCAAAAGGAAGAAGCTGAACATCGGCGCCAAGTGTTTAAAGAATTTCAGGTAAACAAAGATCTGATGGAAATTGCTGGTTCAAAGGCATTTTTCATGCATTGCTTACCAGCAGAAAGAGGGGTGGAGGTGACTGACGAAGTTATTGAAGCTCCAAATTCAATAGTCTTCCCACAAGCTGAGAACCGAATGCATGCACAAAATGCCATAATGCTTCATGTACTCGGCAAGTAG 1074 0.459 MAVIPCHCYRIVASDKPYLSGHNLRRRSPFPSSISFRRRISCVASPAVTQKVALKDFLHIDDFDKDTILKMLDRAIEVKALLKSGDRSFRPFEGKTMSMIFTKPSMRTRVSFETGFSLLGGHAIYLGPNDIQMGKREETRDIARVLCRYNDIIMARVFAHQDILDLAKYATVPVINGLTDYNHPCQIMADALTMIEHIGRFEGTKVVYVGDGNNIVHSWLLMASVIPFHFVCACPKGFEPDAKTVEKARKAGISKIEITNDPKEAVKGADVVYSDVWASMGQKEEAEHRRQVFKEFQVNKDLMEIAGSKAFFMHCLPAERGVEVTDEVIEAPNSIVFPQAENRMHAQNAIMLHVLGK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03599 357 NCBIfam ornithine carbamoyltransferase 55 355 IPR002292 GO:0016743
Viun9g03599 357 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 55 196 IPR006132 GO:0006520|GO:0016743
Viun9g03599 357 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 54 356 IPR024904 GO:0004585|GO:0006591
Viun9g03599 357 FunFam ornithine carbamoyltransferase, chloroplastic 55 190 - -
Viun9g03599 357 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 202 353 IPR006131 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 PRINTS Ornithine carbamoyltransferase signature 272 282 IPR002292 GO:0016743
Viun9g03599 357 PRINTS Ornithine carbamoyltransferase signature 334 345 IPR002292 GO:0016743
Viun9g03599 357 PRINTS Ornithine carbamoyltransferase signature 172 186 IPR002292 GO:0016743
Viun9g03599 357 PRINTS Ornithine carbamoyltransferase signature 132 145 IPR002292 GO:0016743
Viun9g03599 357 PRINTS Ornithine carbamoyltransferase signature 99 113 IPR002292 GO:0016743
Viun9g03599 357 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 183 194 IPR006130 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 308 317 IPR006130 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 320 343 IPR006130 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 101 120 IPR006130 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 Gene3D Aspartate/ornithine carbamoyltransferase 55 185 IPR036901 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 FunFam Ornithine carbamoyltransferase 191 342 - -
Viun9g03599 357 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 50 357 - -
Viun9g03599 357 Gene3D Aspartate/ornithine carbamoyltransferase 186 351 IPR036901 GO:0006520|GO:0016597|GO:0016743
Viun9g03599 357 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 52 356 IPR036901 GO:0006520|GO:0016597|GO:0016743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03599 K00611 - gmx:100796780 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03599 9 41520332 41523433 Viun9g03599 9 41520332 41523433 ECH