Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03575 ATGGCGGCGGAGATAGCGTGCTGCGGAACAAAGTTCTCATTGTACGTGTTGGTGATCGTAGGATTGGTCTGCTTCGCGGGCCTAATGGCTGGTCTTACTCTCGGACTCATGTCCCTCGGACTCGTCGACCTCGAAGTTCTCATGAAATCTGGTCGTCCTCAGGATCGAATTCACGCTTCGAAAATTTATCCAGTGGTTAAGAACCAGCATCTTCTGCTTTGCACGCTTCTAATTGGAAACTCCTTGGCCATGGAGGCTCTTCCTATTTTTCTTGATTCGCTGGTGCATCCTGCTGCTGCAATCTTGATTTCGGTCACTCTCATCCTCATGTTTGGAGAGATATTGCCGCAGGCAATTTGCACAAGATATGGATTGACAGTTGGAGCAACGCTGGCTCCGTTTGTTCGTGTTCTTCTTCTTGTTTTCTACCCGGTTTCTTATCCAATCAGTAAGGTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTGAAGAGGGCAGAGCTCAAGACTTTTGTGAACTTTCATGGAAATGAGGCCGGTAAAGGAGGAGATTTAACTCATGACGAAACGACCATCATTACTGGGGCACTTGAGTTGACAGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCGATAATGACAATTGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAGAAAACTAATATTATTGGACTTGTTCTGGTGAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGGTCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTGTATGATATATTGAACGAATTTCAGAAGGGTCACAGTCATATTGCAGTAGTGTATAAGGATCTAAACAGTAAAAACGAGGCCCCAAAAAAGGTTAAAGATGGGGAACAACATGATCTCAGTGACAACTATAAGAACAAGGGAGAGAATGCAACCTTGGATAAAGGTTCTAAATTGGAGTCAGGTGATACTTTGACTACTGTTACTAAGATTGATGGTGCTCAACAAGCAAAGAAAAGTCCACCAGCAACTCCTGCTTTTAAAAAGCGACATAGAGGGTGTTCATATTGCATCCTGGACCTTGATAATGCGCCCCTGCCAGTATTTCCACCCAATGAAGTGGTTGTTGGTGTTATTACAATGGAGGATGTCATCGAAGAGCTTCTTCAGGAGGAGATATTGGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCAAAGGAGACGGCTTCTGCTGCAAATATGTTGCAACCTTCTCAAGAGGTTCAAGGACACACACCAACTAATTCAATTTCTACAGCTACTTCTGCAACAGGTTCACCCACCACAATCGATCTAATCTCTGAAAGTGAGTCACTAAGGAATCAATAG 1476 0.4262 MAAEIACCGTKFSLYVLVIVGLVCFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDRIHASKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVHPAAAILISVTLILMFGEILPQAICTRYGLTVGATLAPFVRVLLLVFYPVSYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMVIRKIPRVSENMPLYDILNEFQKGHSHIAVVYKDLNSKNEAPKKVKDGEQHDLSDNYKNKGENATLDKGSKLESGDTLTTVTKIDGAQQAKKSPPATPAFKKRHRGCSYCILDLDNAPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKETASAANMLQPSQEVQGHTPTNSISTATSATGSPTTIDLISESESLRNQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03575 491 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Viun9g03575 491 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Viun9g03575 491 FunFam DUF21 domain-containing protein 189 324 - -
Viun9g03575 491 PANTHER METAL TRANSPORTER CNNM 3 456 IPR045095 GO:0010960
Viun9g03575 491 SUPERFAMILY CBS-domain pair 195 417 IPR046342 -
Viun9g03575 491 MobiDBLite consensus disorder prediction 315 347 - -
Viun9g03575 491 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Viun9g03575 491 MobiDBLite consensus disorder prediction 315 343 - -
Viun9g03575 491 Gene3D - 376 423 IPR046342 -
Viun9g03575 491 Gene3D - 189 324 IPR046342 -
Viun9g03575 491 MobiDBLite consensus disorder prediction 447 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03575 Viun-Chr9 41422290 41426747 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03575 K16302 - gmx:100804572 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03575 9 41422290 41426747 Viun9g03575 9 41422290 41426747 ECH