Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03560 ATGGAGTCCGAGCTCAAAGACCTCAATTCCAGGCCTCCCAACGGCAGTTCCGCTAGGGATGACCGTCCTCTCCTGAAGTCCGAGTCTCTAACCTCAGCTGACAGCATCGCCGAGATGGAGAAGAAGTTCGCTGCATACGTTCGCCGCGACATCTACGGCACCATGGGACGCGGCGAGTTGCCGCCGAAAGAGAAGCTCTTGCTCGGTTTCGCGCTGGTCACTCTTCTCCCTATCAGAGTTGTTCTCGCGGTCACCGTGTTGCTCTTCTATTACTTAATTTGTAGGGTTTGTACTCTATTCTATGCACCCAATCAAGAAGATGAACAAGAAGATTACGCTCACATGAGTGGCTGGAGGAGAGCGGTTATTGTTTCCTGTGGTCGCGCCCTCTCCAGAGTCATGCTCTTCATCTTTGGCTTTTATTGGATCCCCGAATCTAACTCTGCTTCTCAGGGAGACAAGCAACAGCCTGAAGAGTCGGACAGACCTGGTGTAATAATATCTAACCATGTGTCATACCTGGACATTTTGTATCACATGTCATCGTCGTTCCCTAGTTTTGTTGCTAAGAGATCAGTGGCTAGACTTCCTCTCGTTGGTCTCATCAGTAAGTGCCTTGGTTGTGTCTATGTACAGCGAGAATCAAAGTCATCAGAGTTCAAGGGTGTTTCAGCTGTTGTTACTGATAGAATTCGAGAAGCTCATCAGAATGAGTCTGCTCCATTAATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGAGTTCCTCCTTCCATTCAAGACTGGTGGCTTTTTGGCAAAGGCACCAGTACTTCCTGTGATTTTGAGATACCATTACCAGAGATTTAGCCCTGCCTGGGATTCCATATCTGGGGTGCGGCATGTGATATTTCTCCTGTGTCAGTTTGTAAATTTTATGGAGGTTATCCGATTACCTATTTACCACCCCTCACAACAGGAGATGGATGATCCCAAACTTTATGCCAATAATGTTAGAAGGTTGATGGCTTCTGAGGGTAATTTGATACTTTCTGATATTGGGCTTGCTGAAAAACGAACATATCATGCTGCTCTCAATGGTAATAATAGCCTGCCTAGTGTTTTGCATCAGAAAGACGAATGA 1125 0.4631 MESELKDLNSRPPNGSSARDDRPLLKSESLTSADSIAEMEKKFAAYVRRDIYGTMGRGELPPKEKLLLGFALVTLLPIRVVLAVTVLLFYYLICRVCTLFYAPNQEDEQEDYAHMSGWRRAVIVSCGRALSRVMLFIFGFYWIPESNSASQGDKQQPEESDRPGVIISNHVSYLDILYHMSSSFPSFVAKRSVARLPLVGLISKCLGCVYVQRESKSSEFKGVSAVVTDRIREAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAWDSISGVRHVIFLLCQFVNFMEVIRLPIYHPSQQEMDDPKLYANNVRRLMASEGNLILSDIGLAEKRTYHAALNGNNSLPSVLHQKDE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03560 374 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g03560 374 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 77 346 - -
Viun9g03560 374 CDD LPLAT_LPCAT1-like 132 353 IPR045252 GO:0008374
Viun9g03560 374 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 33 361 - -
Viun9g03560 374 SMART plsc_2 164 279 IPR002123 GO:0016746
Viun9g03560 374 Pfam Acyltransferase 158 274 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03560 Viun-Chr9 41333024 41338788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03560 1 361 Acyl Lipid Metabolism Gene Families AT1G80950 64.083 3.77e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03560 K13510 - gmx:100820536 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03560 9 41333024 41338788 Viun9g03560 9 41333024 41338788 ECH
Viun8g00226 8 1440704 1446979 Viun9g03560 9 41333024 41338788 PCT