Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03555 ATGCTTGAGGCAATGGAAAGCTCAGTCAATGGTGGGTTCTCTCATTTGCAGAGCTGCGGAGACAGCAGCGAAGAGGAGTTATCGGTGCTGCCACGTCACACCAAAGTGGTGGTAACCGGAAATAACCGTACCAAATCGGTGCTCGTTGGTCTCCAAGGTGTTGTTAAGAAAGCCGTTGGTCTAGGAGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGTTACAAAGAAATGCTCTCAGTGTGATTGAAGCACCCACGGGTAACGAGGAAGATGATGACCTGGAATTTGAAAATATGCAGTGGAATGGATCTGATATGGCATCCGACGACACACAGAAGTCCCACAAACCGAGGCACAGAATGCATAGAACATTGGGATCATCTCATCACAAGACCATGAGTAGGTCCTTCTCTGGCGATTCACACTCAAAGGGGTCCGTTTCTATGCCTCATGGGTCCGCGAAGGTGGACTTGAGCAAACTTGAAATGGCTGCATTGTGGAGATATTGGCGACATTTTAATCTTGTGGATGCGGTCCCAAATCCATCAAAAGAGCAGCTAGTAGACATTGTTCAAAGGCATTTCATGTCGCAGACGAGTTGCAAGTGA 618 0.4741 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKPRHRMHRTLGSSHHKTMSRSFSGDSHSKGSVSMPHGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQTSCK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03555 205 Gene3D - 139 204 IPR038291 -
Viun9g03555 205 MobiDBLite consensus disorder prediction 107 155 - -
Viun9g03555 205 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 202 IPR025718 GO:0005515
Viun9g03555 205 MobiDBLite consensus disorder prediction 133 151 - -
Viun9g03555 205 PANTHER SAP30 21 202 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03555 Viun-Chr9 41301888 41305483 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03555 - - gmx:100809195 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03555 9 41301888 41305483 Viun9g03555 9 41301888 41305483 ECH