Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03477 ATGGGATCCTCTCACAGCCGCGAAGATCTGTTAGAATCATCCGATTCAGAGCAGGAGGAGGAGGAAACCTACGAAGACGCCGCGGGAGGAAGCTCCGAACGGCCACCAAAAACGCTGTCAACTTCATCCATTGATGACGTGGAGGCCAAACTCAAAGCCCTCAAACTCAAATATTCCTCCTCCAGCACCCCCGCCGTTAAAAACGCCGTCAAACTCTACCTCCACGTCGGCGGCAACACCCCCAAAGCCAAGTGGGTAATCTCCGACAAACTCACCACGTATTCTTTCGTCAAAACTCACTCCAACACAGGCACCGACGACGAAAGCGACGATACGGACGACGACGAAAGCAACAGAGAACAACCATTCTGGGTTATGAAAGTCGGTTCCAGAATCCGGGCAAAGGTGGACCCCGAGATGGGCCTGAAGAGTTTCCCCGACCAGCGGCGTGTGGACTTCGTGGCGCGCGGCGTCTGGGCGATGAAGTTCTTCACCTTGCAAGACCAAATCGACTTCATTGATTCCTTCCAGAACTGTCTCTTCGAGAACACGCACGGGGTGGAGGCGACGGAAGCAAATAAGCTCAAGATCTACGGCAAGGATTTCATGGTGTGGGCCAAACCCGAAGCCGCGGACGATTCTATGTGGGAAGACGCAGAAGAAACTTTCTCCAAAAGCGCCACTCCGGTTAGGGCTAATCAGGATTTGAAAGAAGAGTTCGAAGAAGCTTCAAACGGTGGCATTCAGAGCATTGCATTGGGTGCTTTGGATAACAGTTTTTTGGTGAGTGATAACGGGATTCAAGTGGTGAAGAACTTCGCACATGGGATTCACGGGAAGGGTGCTTTCGTGAATTTCAGTGATGGGTATAAAAATGGGGGTGGGGATTCTTCTTCCTATTCTACCCCTAAGAAGACGCTTCTTATGAAGGCTGAGACGAACATGCTTCTGATGAGTCCAATGGGTGGTGGAAAGCTTCACTCCACGGGGCTTCATCAGCTTGATATTGAGACCGGGAAGGTGGTTAGTGAATGGATGTTTGGGAAGGACGGTACAGAGATTACAATGAGGGATATTACCAATGATTGTAAAGGAGCACAGTTGGATCCGTCTGGGTCAACATTTCTGGGGCTGGATGATAACAGACTTTGTAGGTGGGATATGAGGGATCGCAATGGGATGGTTCAGAACTTGGCTGATTCGAATGCCCCTGTTTTGAATTGGGCGCAGGGACATCAGTTTTCGAGAGGGACTAATTTTCAGTGCTTTGCAACTACGGGTGATGGGTCCATTGTTGTAGGGTCTTTGGATGGGAAGATAAGACTGTATTCGGTGAACACGATGAGGCAGGCGAAGACTGCGTTTCCTGGCCTGGGATCTCCCGTCACTCATGTGGATGTTACCTTTGATGGCAAGTGGATTGTGGGTACTACTGATACATACTTGATTCTTATTTGTACCCTCTTTACTGACAAAGATGGAAGGACAAAGACTGGTTTTTCTGGGAGGATGGGGAACAAGATTGCTGCTCCCAGGTTGTTGAAGCTCACCCCTCTTGATTCCCATTTGGCTGGAGCGAATAACAAGTTCCGGAATGCGCAGTTTTCGTGGGTGACGGAGAATGGGAAGCAGGAGCGGCATATAGTAGCCACCGTGGGGAAGTTCAGTGTGATATGGAACTTCCAGCAAGTCAAGGATGGTTCTCATGAGTGCTATCGTAACCAGCAGGGTCTTAAGAGCTGCTACTGCTACAAGATAGTCCTTAGGGATGATTCCATTGTTGAGAGCCGTTTTATGCATGACAGATTTGCAGTCAGCGATTCTCCCGAAGCGCCACTGGTCATAGCAACACCAATGAAAGTTAGCTCTTTCAGCATATCTGGCAAGCGATGA 1893 0.4971 MGSSHSREDLLESSDSEQEEEETYEDAAGGSSERPPKTLSTSSIDDVEAKLKALKLKYSSSSTPAVKNAVKLYLHVGGNTPKAKWVISDKLTTYSFVKTHSNTGTDDESDDTDDDESNREQPFWVMKVGSRIRAKVDPEMGLKSFPDQRRVDFVARGVWAMKFFTLQDQIDFIDSFQNCLFENTHGVEATEANKLKIYGKDFMVWAKPEAADDSMWEDAEETFSKSATPVRANQDLKEEFEEASNGGIQSIALGALDNSFLVSDNGIQVVKNFAHGIHGKGAFVNFSDGYKNGGGDSSSYSTPKKTLLMKAETNMLLMSPMGGGKLHSTGLHQLDIETGKVVSEWMFGKDGTEITMRDITNDCKGAQLDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLADSNAPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSVNTMRQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDTYLILICTLFTDKDGRTKTGFSGRMGNKIAAPRLLKLTPLDSHLAGANNKFRNAQFSWVTENGKQERHIVATVGKFSVIWNFQQVKDGSHECYRNQQGLKSCYCYKIVLRDDSIVESRFMHDRFAVSDSPEAPLVIATPMKVSSFSISGKR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03477 630 MobiDBLite consensus disorder prediction 99 120 - -
Viun9g03477 630 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 628 IPR040458 -
Viun9g03477 630 FunFam Vacuolar import/degradation Vid27-related protein 313 602 - -
Viun9g03477 630 Gene3D - 233 511 IPR015943 GO:0005515
Viun9g03477 630 Pfam VID27 C-terminal WD40-like domain 256 573 IPR013863 -
Viun9g03477 630 MobiDBLite consensus disorder prediction 1 44 - -
Viun9g03477 630 SUPERFAMILY Putative isomerase YbhE 247 528 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03477 1 630 Acyl Lipid Metabolism Gene Families AT3G19240 64.165 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03477 - - gmx:100810233 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03477 9 40903671 40907199 Viun9g03477 9 40903671 40907199 ECH