Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03472 ATGCCGCAGGTTATCATTCCCGGGCAGATTAGCAAGTCCTTTTCCTGTGTTAGACTAGATATACAAAAATCAGTTAAGTGTAGAATTTCCCATGTAATTTTCAGCTTAGTTGCTAGGGACAGGCATGGCAAACTATGTCTTGGTCAGACAAAAGTTGAATCTCTAGTGAAAATCAGGCACACATTATTGTCTAGTAGGATAAGAGTTGCTGGTGAATATCAAGAAGGGTTATCTGATGAAGATGAAGATCTCTGTCCCGTAGAATGTGTAAGAGAATTCACCACTGATGAAGAGTTCAGCAAAATTTTGGAGAAGTCTAAAGGAACTGGATCTTTGGTGGTGGTAGATTTCTTCCGCACCTCTTGTGGAAGCTGCAAGTATATTGAGCAGGGTTTTGCAAAGTTGTGCAAGAAATCCGGCGATCATGAAGCTCCAGTAATCTTTCTAAAGCATAATGTAATGGATGAGTATGACGAGCAGTCCGAGGTTGCTGATCGACTTAGAATCAGGGCCGTGCCTCTTTTCCACTTCTACAAAGATGGGGTGCTGTTGGAAGCATTTCCAACCAGGGACAAAGAAAGGATTGTTGCGGCCATTCTCAAGTACTCATCTCTTGAAGCTGAAGATATCTTAGTTTAA 639 0.4178 MPQVIIPGQISKSFSCVRLDIQKSVKCRISHVIFSLVARDRHGKLCLGQTKVESLVKIRHTLLSSRIRVAGEYQEGLSDEDEDLCPVECVREFTTDEEFSKILEKSKGTGSLVVVDFFRTSCGSCKYIEQGFAKLCKKSGDHEAPVIFLKHNVMDEYDEQSEVADRLRIRAVPLFHFYKDGVLLEAFPTRDKERIVAAILKYSSLEAEDILV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03472 212 CDD TRX_family 97 199 - -
Viun9g03472 212 ProSiteProfiles Thioredoxin domain profile. 73 204 IPR013766 -
Viun9g03472 212 Gene3D Glutaredoxin 73 206 - -
Viun9g03472 212 SUPERFAMILY Thioredoxin-like 79 202 IPR036249 -
Viun9g03472 212 FunFam Thioredoxin-like 4, chloroplastic 70 206 - -
Viun9g03472 212 PANTHER THIOREDOXIN-LIKE 4, CHLOROPLASTIC 68 208 IPR044176 -
Viun9g03472 212 Pfam Thioredoxin 94 199 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03472 Viun-Chr9 40893719 40896661 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03472 - - vum:124831306 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03472 9 40893719 40896661 Viun9g03472 9 40893719 40896661 ECH