Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03427 ATGAAAATGGGGATTTCCAAGACAAGCACTGAGGTTACCGACAATTCCAATTCCAATAGCAACAGCAATAGCGATAGCAGCAATAGCAATAGCAGCAGCAGCACTCAGACTGAAACTGACAACCATATCTCCCTTCCTGCTCCCTACGCCGAAGGAGAGAAGCTATTGGCCACCCACTCTAATCATCTTTACGTAGCCAAGGTTAGGCAAGTTGAGTACAACATCACTGAAGGCTGGCAGTTCCTCGTTCATTATCTCGGTTGGAAGAAAAGTTGGGATGAATGGGTTGGAATGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACGTGCCCTTGATGAGAAGCATGGCATTGACAAGAATCCGAAAGTCCCACGTGGTCCTCTGGCTAAATCCAAGAGTACTAACGTTTCAAGAGGCCGGAAGCGACGGAATGAACCTGTCATCAAGCCCAAAACTGCTCTTGATCCTGACAAGCTTGTCACCATTCAAATTCCTCCAACGCTGAAGAAACAACTACTTGATGATTGTGAGTTTATTAACCATCTCGGCAAGCTCGTTAAACTTCCTCGTTCTCCTAATGTGAAAGACATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGATGGCTGATTCGGTTGAAGAAATTATGAAAGGATTGTGTCGTTACTTTGATAAAGCACTGCCAGTGATGCTCTTGTACAAGACCGAGCGCCAACAGTACCAAGAAGCTTGTCCAGCCAATGTGTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGCCTCTTTGTTAAGTTGCCCGAGTTATTGTTCCATGCTAGCATTGAAGAGGAGACATTGACGGAGCTTCGGGCACAGTTTCTTGACTTTCTCAGGTTCTTGCAAAAAAATCACAGCACACTCTTCCTTTCTACTTATCATGTTGCTGAAGATATGGAGATTAGCTCCGATAAAAAAGGTGACTAG 990 0.4364 MKMGISKTSTEVTDNSNSNSNSNSDSSNSNSSSSTQTETDNHISLPAPYAEGEKLLATHSNHLYVAKVRQVEYNITEGWQFLVHYLGWKKSWDEWVGMDRLMKHTEENMRKKRALDEKHGIDKNPKVPRGPLAKSKSTNVSRGRKRRNEPVIKPKTALDPDKLVTIQIPPTLKKQLLDDCEFINHLGKLVKLPRSPNVKDILKNYFDYRLKKCGSMADSVEEIMKGLCRYFDKALPVMLLYKTERQQYQEACPANVFPSAIYGAEHLLRLFVKLPELLFHASIEEETLTELRAQFLDFLRFLQKNHSTLFLSTYHVAEDMEISSDKKGD 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03427 329 Pfam RNA binding activity-knot of a chromodomain 51 101 IPR025995 -
Viun9g03427 329 Pfam MRG 159 314 IPR026541 -
Viun9g03427 329 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 48 318 IPR008676 GO:0005634|GO:0006325|GO:0006355
Viun9g03427 329 ProSiteProfiles MRG domain profile. 160 327 - -
Viun9g03427 329 SUPERFAMILY Chromo domain-like 41 183 IPR016197 -
Viun9g03427 329 Gene3D - 29 129 - -
Viun9g03427 329 Gene3D MRG domain 160 327 IPR038217 -
Viun9g03427 329 MobiDBLite consensus disorder prediction 1 44 - -
Viun9g03427 329 FunFam Chromatin modification-related protein EAF3 160 323 - -
Viun9g03427 329 MobiDBLite consensus disorder prediction 112 153 - -
Viun9g03427 329 MobiDBLite consensus disorder prediction 6 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03427 Viun-Chr9 40512256 40517502 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03427 K11339 - gmx:100800645 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03427 9 40512256 40517502 Viun9g03427 9 40512256 40517502 ECH