Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03353 ATGTCATGGTTGTCTCGCTCCTTCTCAAATTCTCTCCGACTCGATGGCGATGGAGATCACGAAAACGACACCGTACTCGATCCACCTACCACGTCATTGAGAGACCCCCTGCAGCCGCAAGCACGAGAAAATGAATTCAGATCAGAATCAGAAGAAGAAGACGAAGAAACGGAAGGTCGTGGAGTCAAAGAGGACCTCGACGAAATCAAGCAAACCCTAACTCGTCAATTTTGGGGAATGGCATCCTTCCTCGCTCCGCCGTCAACGGATTCTCATTCTCATTCTCTTTCTCTTGCTCATACTCAATCCGATCCCTCTTCGTTTATCTCCGATCAATTCAAGCATCGCTCTCTTTCTCCGAACGAAGAACCGCAGTTGGACGAGGCTGCCGTTTCCAATCGCTCTAATTCGATTTCATTGGGATCCGATTCGGAAGGGGATTGCGGTCCAGAACAACGCGCTGTTGGAATCACGGAGGAGGTTTTGACCTTCGCGGTGAACATCGCTATGCATCCCGAGACGTGGTTGGATTTTCCTATTGACGAAGAAGACGACACCGACGATTTTGACATGTCTGATGCACAAAAACAGCATGCAGCGGTTGTTGAAAGATTAATTCCTAGATTAGCTGCGCTCAGAATTGAACTATGCCCTTGCTTTATGAGTGAAAGTTATTTCTGGAAAGTGTATTTTGTACTTTTGCATTCGAGGCTTAACAAAGAAGATGCAGGGGTTTTGTCTACATCCCAGATCACGGCAGCTAGAGCAATGTGGATGCAGGAGTTGCATAAACAAACAAAGCCTGACTTTGAAATTTTTGGAAGAAGTGCTTCATACCCAAAAGACAATGCACGGTACAATGAATTAACTCCCAGCCTATTAAATGATGATTGTTCTGATGACATGCCTAATCCGACATATGGATATAGAACAACCTCTTTCTCCGTAAGGACAGATTATGAGACTGATAAATACATGGTTGAAACATCTGGAACGCATCTCACTGATAAGTCTGTTATTGAGGAAAGGTCAATTATTAAAACTGATAACAAGGATCCGAAATGTGGTCGACCCTCTCAAATTATTATTAAGGATTATGATGAAGAAGACGATGAGTGGCCAGAGGAAGATTCTGATTTAGGAGAATATGGTGGAACAACTCACCCCATAGTAAATGAAGAAGACATATCCTTCAGCGATCTCGAAGATGATGACTATGGCATTAAACCTGTTACTTTAAGTACAGGTGGTTTGAAGTTGGTTTGA 1266 0.4368 MSWLSRSFSNSLRLDGDGDHENDTVLDPPTTSLRDPLQPQARENEFRSESEEEDEETEGRGVKEDLDEIKQTLTRQFWGMASFLAPPSTDSHSHSLSLAHTQSDPSSFISDQFKHRSLSPNEEPQLDEAAVSNRSNSISLGSDSEGDCGPEQRAVGITEEVLTFAVNIAMHPETWLDFPIDEEDDTDDFDMSDAQKQHAAVVERLIPRLAALRIELCPCFMSESYFWKVYFVLLHSRLNKEDAGVLSTSQITAARAMWMQELHKQTKPDFEIFGRSASYPKDNARYNELTPSLLNDDCSDDMPNPTYGYRTTSFSVRTDYETDKYMVETSGTHLTDKSVIEERSIIKTDNKDPKCGRPSQIIIKDYDEEDDEWPEEDSDLGEYGGTTHPIVNEEDISFSDLEDDDYGIKPVTLSTGGLKLV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03353 421 SUPERFAMILY BSD domain-like 156 242 IPR035925 -
Viun9g03353 421 ProSiteProfiles BSD domain profile. 186 238 IPR005607 -
Viun9g03353 421 MobiDBLite consensus disorder prediction 365 379 - -
Viun9g03353 421 Gene3D BSD domain 154 249 IPR035925 -
Viun9g03353 421 MobiDBLite consensus disorder prediction 88 115 - -
Viun9g03353 421 Pfam BSD domain 186 242 IPR005607 -
Viun9g03353 421 MobiDBLite consensus disorder prediction 1 66 - -
Viun9g03353 421 MobiDBLite consensus disorder prediction 365 403 - -
Viun9g03353 421 MobiDBLite consensus disorder prediction 126 143 - -
Viun9g03353 421 MobiDBLite consensus disorder prediction 88 151 - -
Viun9g03353 421 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 406 - -
Viun9g03353 421 SMART wurzfinal6 186 238 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03353 Viun-Chr9 40145262 40149302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03353 156 238 EF-hand Containing Proteins AT1G69030 31.183 7.67e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03353 - - gmx:100794286 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03353 9 40145262 40149302 Viun9g03353 9 40145262 40149302 ECH