Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03343 ATGGCACCACCGTTGTTCAATTGGGGGGTGAAAGACACCCACAGGGGAACCCCTGTGGTGGTGAAGATGGAGAACCCAAATTGGTCGATGGTGGAACTGGAGGGTCCCGAAGAAGATGACTTAATGACACCGACCTCTTCTCCTGCGGGTGTTTCACGAGACAAAGGAAAAGGAAGGGGCAAAAATGCGAAACAGCTCACATGGGTTCTTCTCCTCAAAGCACACCGCGCCGCCGGTTGCCTGACCTCCCTGGCGCCGGCATTGTGGGGGCTCGTCTCCGCCGTGAAGCGCCGCGTCGCCGCTGGAAAAACTGATGCCGACACCGACGGAGGCAGGGAGCTGGAGAACCCCACCGTGAAGACGCGTTTCTATTCCTGCATCAAGGTCTTTCTGTGGCTTTCCGTTTTTCTCTTGTTTCTCGAGGTTGCTGCGTACTTCAAAGGGTGGCATTTCGTTGCGGCGGGGATTCAGTTCGAGCACTTTCTGTGGGCACCCGCGTTTGGAGTCAAGGATTTCTTTGCTTGGCTCTACGCGAGTTGGGTTTTTGTTCGCGTGGAGTATCTCGCTCCTCCTCTGCAGTTTCTAACCAATGCGTGCATCGTGCTTTTCCTTATTCAGAGTGTGGATAGGCTTGTTCTGTGTTTGGGGTGTTTCTGGATCCGGTTTAAGAAGATCAAGCCTGTCCCCAAATGTGGGGATGCAATTGCAGATCTTGAATCTGGAGAAAGCAAGGGTTTTTCGTTTTTCCCAATGGTTCTTGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCGATTGGTGCGGTGTGTAATTTGGATTGGCCGAAGGGGAAGTTGTTGATTCAGGTTTTGGATGATTCAGATGACCCAACGACGCAGCAGCTAATAAAGGAGGAGGTTCAGAAGTGGCAACAAGAGGGTGCCAACATTTTGTACCGGCATCGCGTGATTAGAGATGGGTACAAGGCCGGGAATTTGAAATCCGCCATGAATTGTAGCTACATTAAAGACTATGAGTTTGTCGCAATTTTTGATGCAGATTTTCAACCTACTCCAGATTTTCTAAAAAAAACGGTTATTCACTTTAAGGATAATGATGAATTGGGGCTTGTCCAAGCAAGATGGTCCTTTGTGAACAAGGATGAAAACCTGCTAACGAGGTTGCAGAACATTAACCTGTCTTTTCATTTTGAGGTAGAGCAGCAAGTGAATGGGATTTTCATTAACTTCTTTGGGTTCAATGGAACTGCTGGAGTTTGGAGGATAAAGGCTTTGGAGGAAGCTGGTGGTTGGTTGGAGAGAACTACTGTTGAGGACATGGACATTGCCGTTCGAGCACATCTTCATGGCTGGAAATTCGTTTTCCTCAATGATGTTGAGTGCCAATGTGAGCTACCGGAATCATATGAAGCATACAGGAAACAGCAGCACAGATGGCATTCTGGGCCAATGCAGTTGTTCCGCCTTTGTTTGCCTGATATCATACGGTCCAGGATAAGTGTGTGGAAGAAATTCAACATGATATTTCTGTTCTTCCTTCTGAGAAAGCTGATCTTACCATTCTATTCGTTCACCTTGTTTTGTATAATTCTACCTATGACAATGTTCGTGCCGGAGGCTGAGCTTCCTGCGTGGGTAGTGTGTTACATCCCTGCTGCTATGTCCTTTCTCAACATTCTTCCAGCTCCGAAGGCCTTTCCCTTCATTGTACCTTATCTCCTATTTGAGAACACCATGTCAGTTACCAAGTTCAATGCAATGATCTCAGGCCTCTTCCAGCTAGGTAGTGCATACGAGTGGGTGGTGACTAAGAAATCTGGTCGTTCTTCTGAAGGCGATTTGGTTTCATTGATTGAGAAAGGACCAAAGCTTCAAAGAGGGTCCTCAGCACCTGATCTTGAGGAAATAAAGGAGGAACTGAGAAGGCAGGAGCAGAAAACCTCTAAGAAGAAGAAAAAGCATAACAGAATATATATGAAGGAGCTTGCATTGGCCTTTCTACTCTTAACAGCCTCAGCAAGGAGTCTCCTCTCCGCCCAAGGGATCCATTTCTACTTTTTGTTATTCCAGGGAATATCATTCCTCTTGGTTGGTCTTGACTTGATTGGTGAACAGGTGGACTGA 2133 0.4721 MAPPLFNWGVKDTHRGTPVVVKMENPNWSMVELEGPEEDDLMTPTSSPAGVSRDKGKGRGKNAKQLTWVLLLKAHRAAGCLTSLAPALWGLVSAVKRRVAAGKTDADTDGGRELENPTVKTRFYSCIKVFLWLSVFLLFLEVAAYFKGWHFVAAGIQFEHFLWAPAFGVKDFFAWLYASWVFVRVEYLAPPLQFLTNACIVLFLIQSVDRLVLCLGCFWIRFKKIKPVPKCGDAIADLESGESKGFSFFPMVLVQIPMCNEKEVYQQSIGAVCNLDWPKGKLLIQVLDDSDDPTTQQLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYIKDYEFVAIFDADFQPTPDFLKKTVIHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSRISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKLQRGSSAPDLEEIKEELRRQEQKTSKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03343 710 MobiDBLite consensus disorder prediction 36 59 - -
Viun9g03343 710 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 246 467 IPR029044 -
Viun9g03343 710 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 707 - -
Viun9g03343 710 Coils Coil 633 660 - -
Viun9g03343 710 SUPERFAMILY Nucleotide-diphospho-sugar transferases 252 529 IPR029044 -
Viun9g03343 710 FunFam probable xyloglucan glycosyltransferase 5 243 468 - -
Viun9g03343 710 Pfam Glycosyl transferase family group 2 344 538 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03343 Viun-Chr9 40063142 40066907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03343 4 710 Miscellaneous Gene Families AT4G07960 76.250 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03343 - - gmx:100805969 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03343 9 40063142 40066907 Viun9g03343 9 40063142 40066907 ECH