Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03332 ATGATTCGAACATCCTTTCCCAGTTTCAGGAAATTGCTTCCTCAGAGTGTTTCTGCTTCTGCGTTCTCCAAGATTGGAACATACAATTGGTTTACTTCTCAGCCCTACCCTCTTGAGAGTCCCAACCCTTCTTACAGTGATGATGAGTATGCTGATGTGGATTGGGACAGCCTTGGATTTGGATTGATGGCTACTGATTATATGTACATTACTAAATGTTGTGAGGGACAACATTTTCGAGAAGGCCAACTCAGCCGTTATGGGAATATCGAACTCAGCCCCGCTGCTGGAGTCCTAAATTATGGTCAGGGATTATTTGAAGGAACAAAAGCATACAGAAAAGAAAATGGACGCGTGCTACTCTTCCGTCCGGAACAAAATGCCATTCGAATGAAGATGGGTGCAGAAAGAATGTGCATGGCATCTCCTTCCATAGACCATTTCGTTCATGCTTTGAAACAAACTGTCTTGGCTAATAAACGTTGGATTCCTCCACCGGGAAAAGGGTCCTTGTACCTTAGGCCTCTGCTCTTGGGAACGGGTCCAGTTTTGGGTTTGGCTCCCGCACCAGAATACACATTCCTCATATACGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGTTCGGCTCCGCTCAACTTGCACGTTGAGGAGAACTTTGACCGTGCTTCTCGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTTTTGATGGCGCAAACTACAGCCAAGAAAAGAGGATTTTCAGATGTTTTGTACCTTGATTCGGCCACCAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGAAAATGCATCGCTACTCCTGCTACCAATGGGACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCGGGTGATCTTGGCTATCAGGTAGAAGAGCGTGCTGTTGGTGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCTGTAGGTGTTGCCCCTGTTGGGAGTATCACATATCAGGATAAAAGGATGGAATATATAACGGGCTCTGGAACCATTTGTCAAGAGTTGAACGATACCATTTCAGGAATTCAAACTGGTACTATTGAAGATAAGAAGGGATGGATTATTGAAGTAGATTAA 1158 0.4447 MIRTSFPSFRKLLPQSVSASAFSKIGTYNWFTSQPYPLESPNPSYSDDEYADVDWDSLGFGLMATDYMYITKCCEGQHFREGQLSRYGNIELSPAAGVLNYGQGLFEGTKAYRKENGRVLLFRPEQNAIRMKMGAERMCMASPSIDHFVHALKQTVLANKRWIPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLHVEENFDRASRRGTGNVKTISNYAPVLMAQTTAKKRGFSDVLYLDSATKKNLEEVSSCNIFIAKGKCIATPATNGTILSGITRKSVIEIAGDLGYQVEERAVGVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNDTISGIQTGTIEDKKGWIIEVD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03332 385 Gene3D - 34 212 IPR043131 -
Viun9g03332 385 PIRSF BCAT1 38 385 IPR005786 GO:0004084|GO:0009081
Viun9g03332 385 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 45 381 IPR036038 GO:0003824
Viun9g03332 385 ProSitePatterns Aminotransferases class-IV signature. 268 297 IPR018300 GO:0003824
Viun9g03332 385 FunFam Branched-chain-amino-acid aminotransferase 38 211 - -
Viun9g03332 385 Pfam Amino-transferase class IV 104 342 IPR001544 GO:0003824
Viun9g03332 385 Gene3D - 213 384 IPR043132 -
Viun9g03332 385 CDD BCAT_beta_family 91 372 IPR033939 GO:0004084|GO:0009081
Viun9g03332 385 FunFam Branched-chain-amino-acid aminotransferase 213 384 - -
Viun9g03332 385 PANTHER AMINO ACID AMINOTRANSFERASE 42 384 IPR005786 GO:0004084|GO:0009081
Viun9g03332 385 NCBIfam branched-chain-amino-acid transaminase 81 384 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03332 Viun-Chr9 39980414 39986958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03332 K00826 - gmx:100782644 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03332 9 39980414 39986958 Viun9g03332 9 39980414 39986958 ECH