Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03287 ATGAATAAATTAGTCAAGAGGGAAGGTTTTCAAGGATTATATAAGGGAAATGGAGCTGGTGTTATCCGCATTGTTCCGTATGCAGCCTTGCATTTTATGACATATGAGCGCTACAAAAGTTGGATCTTGAATAATTATCCAGTGTTAGGTTCGGGTCCTTGTATTGATCTTTTAGCAGGCTCTGCTGCAGGGGGAACTTCAGTTTTGTGTACCTACCCGTTGGATCTTGCTCGTACCAAACTTGCTTACCAGGTGGTGGATACAAGAGGAGATATCAAAGATGGTATAAGAGGAGTTCAACCTACACATAATGGCATTAAAGGTGTGCTTACAAGTGTCTATAAGGAAGGCGGAGCCCGTGGACTTTATAGGGGTGCAGGACCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTATGAGAAACTGAAGACTAACCTTCCAGAAGAACATCAAAAGTCCATTGTGATGCGTCTTTCTTGTGGAGCTCTAGCTGGACTGTTTGGGCAGACTTTAACATACCCTTTAGATGTTGTCAAGAGACAGATGCAGGTTGGCAGCCTGCAGAATGCTAGTCATGAGAATGTCAGATATAAAAATACCATTGATGGACTTAGGACGATTGTTCGTACTCAAGGATGGAGGCAGCTGTTTCATGGCGTAAGCATTAACTATATAAGGATTGTTCCTTCAGCAGCAATTAGTTTCACCACATACGACATGACGAAGTCTTGGCTTGGCATACCACCTCAGCAGCAAAAGTCTCGATCAGTTTCGGCAGCATGA 798 0.4298 MNKLVKREGFQGLYKGNGAGVIRIVPYAALHFMTYERYKSWILNNYPVLGSGPCIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTRGDIKDGIRGVQPTHNGIKGVLTSVYKEGGARGLYRGAGPTLTGILPYAGLKFYMYEKLKTNLPEEHQKSIVMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNASHENVRYKNTIDGLRTIVRTQGWRQLFHGVSINYIRIVPSAAISFTTYDMTKSWLGIPPQQQKSRSVSAA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03287 265 ProSiteProfiles Solute carrier (Solcar) repeat profile. 157 249 IPR018108 -
Viun9g03287 265 PANTHER SOLUTE CARRIER FAMILY 25 2 252 - -
Viun9g03287 265 PRINTS Mitochondrial carrier protein signature 123 141 IPR002067 GO:0055085
Viun9g03287 265 PRINTS Mitochondrial carrier protein signature 166 188 IPR002067 GO:0055085
Viun9g03287 265 PRINTS Mitochondrial carrier protein signature 66 84 IPR002067 GO:0055085
Viun9g03287 265 PRINTS Mitochondrial carrier protein signature 16 36 IPR002067 GO:0055085
Viun9g03287 265 Pfam Mitochondrial carrier protein 2 45 IPR018108 -
Viun9g03287 265 Pfam Mitochondrial carrier protein 55 152 IPR018108 -
Viun9g03287 265 Pfam Mitochondrial carrier protein 157 250 IPR018108 -
Viun9g03287 265 Gene3D Mitochondrial carrier domain 1 251 IPR023395 -
Viun9g03287 265 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 150 IPR018108 -
Viun9g03287 265 SUPERFAMILY Mitochondrial carrier 3 244 IPR023395 -
Viun9g03287 265 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 41 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03287 Viun-Chr9 39712345 39715864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03287 33 257 Organic Solute Cotransporters AT1G14560 69.432 2.85e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03287 - - vum:124826084 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03287 9 39712345 39715864 Viun9g03287 9 39712345 39715864 ECH