Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03274 ATGGATCAGTTCAAAGGACAACCTCGTCTTCCAAAATTCGCCATTCCCAAACTGTACGACATTAGGCTCAAGCCCGACCTCGTCGAGCACCGTTTCGCTGGATCGGTCGCCGTCGACCTCGACATCGTCGCCGGCACCTCTTTCATCGTTCTCAATGCTGCCGAACTCTCCGTCACACCCGACTCCATTTCATTCACCGTTGGAGATTCCTCCACGGTTTTTAAGCCTTCGCGAGTTGAGTTGTTTGAAAGTGATGAGATTCTGGTTCTGGAGTTCCCGCAGGAAATACCCGTTGGGCTGGGTGTATTGTCTATTCTTTTTGAAGGAATCTTGAACGATAGAATGAAAGGGTTCTACAGAAGTACCTATGAACATAATGGTGAGAAGAAGACTATGGCAGTTACACAATTTGAACCAGCTGATGCCAGGCGTTGCTTTCCTTGTTGGGATGAACCTGTTTGCAAGGCTACTTTCAAGATCACATTGGATGTGCCTTCAGAGCTTGTTGCTCTTTCCAACATGCCAGTTGTTGAAGAAATAACAAATGGAGATCTAAAAACAGTTTCGTATCAAGAATCACCAATCATGTCTACTTACTTGGTTGCTGTTGTAGTTGGTTTGTTTGATTATGTGGAAGATCACACCCCTGACGGCGTCAAAGTCCGAGTGTACTGTCAAGTTGGTAAGGCAAACCAGGGGAAATTTGCGCTTGATGTGGCTGTGAAAACTTTGGAACTTTACAAAAACTACTTCGCTACTCCTTACTCTCTGCCAAAATTGGATATGATTGCGATCCCTGATTTTGCTGCTGGAGCCATGGAGAATTATGGTCTGGTTACATATCGGGAGACTGCTTTGTTATATGATGACCAGCATTCTGCTGCTGCAAACAAACAGAGGGTTGCAACTGTTGTAGCTCACGAACTAGCTCACCAGTGGTTTGGCAATCTTGTTACGATGGAGTGGTGGACACATTTATGGCTGAATGAGGGGTTTGCAACATGGGTGAGCTATTTAGCAACTGATAGCTTGTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAATCCACGGAGGGTCTTAGGTTGGATGGACTTGCAGAATCCCACCCAATTGAGGTGGAGATAAATCATGCTTGTGAGATTGATGAAATATTTGATGCAATAAGTTATAGAAAAGGTGCATCTGTTATTAGGATGCTGCAAAGCTATCTCGGTGCTGAATGCTTTCAGAGGTCGCTGGCTTCATATATAAAAAAATATGCTTGCTCAAATGCTAAGACTGAGGATCTCTGGGCTGCACTTGAGGAAGGATCTGGTGAACCCGTGAACAAGTTAATGACCTCATGGACAAAGCAGAAGGGATATCCTGTTGTATCTGTTAAAGTCAATGATCAGAAATTGGAATTTGATCAGTCACAATTCTTGTCAAGTGGTGCTCAAGGAGAAGGCGAATGGATTGTTCCAGTAACATTATGCTCTGGCACTTATGATGTCCGCAAGAGTTTCCTCTTGCAATCAAAATCTGATGCACATGACGTCAAAGACTTCATTGGTACCGCAGACATAAATGACTGGATTAAACTTAATGTGGATCAGGCTGGTTTTTATAGGGTGAAATATGATGAGGTGCTTGCTGCTAAGCTTAGATATGCAGTAGAGAAACAACTCTTATCTGCCTCAGACCGATTTGGCGTTTTGGATGATTCATATGCACTTTGTATGGCTCGCCAAGAATCATTGACCTCCTTGATTAACTTGATGGGATCATACAGAGAGGAAGTTGATTATACCGTGCTGTCTAACCTAATAACTATAACTCTTAAAGTTGAACGCATTGTAGCCGATGCTAAACCTCAATTGCTAGATTATTTCAGGCAGTTCTTTATTGGTCTTCTCCAGCACTGTGCTGAGAGGCTTGGTTGGGAGCCTAAACCAGAAGAAAGTCATCTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCCCTTGCTGTGCTTGGTCATGATTTAACACTGGAAGAAGGAAACAAGCGTTTTCAGGCATTCTTAGAGGACAGGAATACACCACTTCTCCCGCCTGATACAAGAAAGGCAGCATATGTAGCTGTAATGCAAGGGGCAAGCAAATCTACTCGATCCGGTTATGATTCCCTTTTGAAAGTATACAGAGAAACTGACCTTAGCCAGGAGAAAACACGAATTCTTGGCTCTCTGTCATCTTCACGTGATCCAGAGCTAATTCTTGAAGCTCTTAACTTTATGTTGTCATCTGAGGTTCGGAGCCAGGATGCCGTTTTTGGACTTGCTGTTAATAGAGAAGGACGAGATGTAGCTTGGTTATGGCTTAAGGACAACTGGGAACACCTCACAAAAACATATGGTTCAGGATTTCTGATAACTCGCTTTGTCAGTGCAGTTGTCTCACCGTTTGCTTCCCTTGAGAAGGCCAAGGAGGTAGAAGAATTCTTTGCAAGCCATGGTACGCCTTCCATTGCTAGAACTTTAAAGCAGAGCCTTGAGCGGGTTAATATCAATGCAAACTGGGTTGAGAGTATTATGATTGAAGAAAGCCTTACTGATGCTGTGAGGGAACTGGCATACAGAAAATATTAG 2616 0.4343 MDQFKGQPRLPKFAIPKLYDIRLKPDLVEHRFAGSVAVDLDIVAGTSFIVLNAAELSVTPDSISFTVGDSSTVFKPSRVELFESDEILVLEFPQEIPVGLGVLSILFEGILNDRMKGFYRSTYEHNGEKKTMAVTQFEPADARRCFPCWDEPVCKATFKITLDVPSELVALSNMPVVEEITNGDLKTVSYQESPIMSTYLVAVVVGLFDYVEDHTPDGVKVRVYCQVGKANQGKFALDVAVKTLELYKNYFATPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWSQFLHESTEGLRLDGLAESHPIEVEINHACEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMTSWTKQKGYPVVSVKVNDQKLEFDQSQFLSSGAQGEGEWIVPVTLCSGTYDVRKSFLLQSKSDAHDVKDFIGTADINDWIKLNVDQAGFYRVKYDEVLAAKLRYAVEKQLLSASDRFGVLDDSYALCMARQESLTSLINLMGSYREEVDYTVLSNLITITLKVERIVADAKPQLLDYFRQFFIGLLQHCAERLGWEPKPEESHLDAMLRGEILTALAVLGHDLTLEEGNKRFQAFLEDRNTPLLPPDTRKAAYVAVMQGASKSTRSGYDSLLKVYRETDLSQEKTRILGSLSSSRDPELILEALNFMLSSEVRSQDAVFGLAVNREGRDVAWLWLKDNWEHLTKTYGSGFLITRFVSAVVSPFASLEKAKEVEEFFASHGTPSIARTLKQSLERVNINANWVESIMIEESLTDAVRELAYRKY 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03274 871 Gene3D - 457 542 - -
Viun9g03274 871 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 462 - -
Viun9g03274 871 Gene3D Neutral Protease Domain 2 209 456 IPR027268 -
Viun9g03274 871 CDD M1_APN-Q_like 19 453 IPR034016 -
Viun9g03274 871 Pfam ERAP1-like C-terminal domain 527 844 IPR024571 -
Viun9g03274 871 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Viun9g03274 871 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 3 852 - -
Viun9g03274 871 FunFam Aminopeptidase 457 542 - -
Viun9g03274 871 Gene3D tricorn interacting facor f3 domain 3 208 IPR042097 -
Viun9g03274 871 Pfam Peptidase M1 N-terminal domain 16 200 IPR045357 -
Viun9g03274 871 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Viun9g03274 871 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Viun9g03274 871 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Viun9g03274 871 PRINTS Membrane alanyl dipeptidase (M1) family signature 323 335 IPR001930 GO:0006508
Viun9g03274 871 PRINTS Membrane alanyl dipeptidase (M1) family signature 304 319 IPR001930 GO:0006508
Viun9g03274 871 Pfam Peptidase family M1 domain 235 451 IPR014782 GO:0008237|GO:0008270
Viun9g03274 871 FunFam Aminopeptidase 545 862 - -
Viun9g03274 871 Gene3D - 545 855 - -
Viun9g03274 871 FunFam Aminopeptidase 210 456 - -
Viun9g03274 871 FunFam Aminopeptidase 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03274 Viun-Chr9 39624895 39632373 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03274 K08776 - gmx:100811437 1565.82