Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03252 ATGGCTTCAGCTTCTGTTCCAGTGGCTTTGTCTCTGACCTCTGTCACGCACACCAAGCCTTCATCCCAAGCCTTCTTCAAGCCACTGCCAAAGAGGACCCTCTCAAAAAAGCCACCGTCAAAATCCAACCTTCAAATTAATGCATCTTTGAAGGAGAAGGCAGTGACAGGACTCACAGCCGCCACCGTCACAGCCTCCATGGTGATCCCGGAGGTGGCTAATGCTGCTGCATCCGATTTCTCTCCTTCTCTCAAGAACTTTCTACTCAGCATCTTCGCCGGTGGAGTTGTGCTGGTAGCCATATTTGGAGCAGTTGTTGGTGTTGCCAACTTTGATCCGGTGAAGAGGACTTAA 354 0.5056 MASASVPVALSLTSVTHTKPSSQAFFKPLPKRTLSKKPPSKSNLQINASLKEKAVTGLTAATVTASMVIPEVANAAASDFSPSLKNFLLSIFAGGVVLVAIFGAVVGVANFDPVKRT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03252 117 PANTHER OS07G0673550 PROTEIN 1 117 - -
Viun9g03252 117 Gene3D Single helix bin 80 117 - -
Viun9g03252 117 Pfam Photosystem II reaction centre X protein (PsbX) 81 116 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03252 Viun-Chr9 39491376 39491998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03252 - - gmx:100305487 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03252 9 39491376 39491998 Viun9g03252 9 39491376 39491998 ECH