Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03232 ATGGGTAACAGACAAGTATATTTGGCCATAATTATAGCATGGCTTACTTTGTTTGAAGGAAACATGATGCTTGTTAATGGTGATTTGAATTACAAGGAGGCTCTCACCAAATCCCTTATCTTCCTCGAGGCACAACGATCAGGGAAACTTCCCTCGAGTAACAGGGTGCCATGGAGAGGAGACTCAGGACTCGACGATGGAAAACTCGTCAACGTGGACCTTGTCGGGGGATACTATGATGCCGGGGACAACGTGAAATATGGTCTCCCCATGGCGTTCACCGTTACTACGCTGGCATGGGCTGCTATTTTTTACAAGGAAGAATTTAAAGAAGCAAAAGAGCATGATCATCTTCTCGCTGCCATTCGTTGGGGCACTGATTATTTTCTGAAATGTAGTTCTCGACGCAAGAGATTATACGTAGAGGTAGGGGACGCGGAAGAGGATCACAAGTGTTGGATGCCACCGGAATATATGAAGACAAAGAGAACGGTTAAGAAGATCGGTGACGGTACGGCCGGGAGTGAAATCGCAGCTGAAACTGCAGCTGCAATGGCAGCTTCTTCCATCGTTTTCAGACCCAAAAATCGCAAATATGCTCGCACTCTTCTCAACAAAGCTAAAACGCTTTTCCATATGGCCAAATCCCATAAAGGAACCTACGATGGAGAGTGTCCCTTCTACTGCTCTTATTCCGGCTACAATGACGAAATGATGTGGGCAGCAACATGGCTATACATGGCTACGAGGAAGTCAACGTATTTGAAGTACATATTAGAAGATTCCAAGAGTGCTAGTGTAGCAGAATTTAGTTGGGACCTTAAATATGCTGGAGCCCAAGTCCTTCTTAGCCAGTTATATTTCGAGGGTGAAAAGAAGTTCGAAAAATTCAAAAACCATGCAGAAAGTTTCATGTGCTCTGTCCTTCCAGAGAGTCCCTACAACCAGATTACAATGTCTCCTGGTGGCTATATTCATTTAAGAAACGGAGCGAACTCGCAGTATGCAACTAGCAGCGCTTACTTGTTCATTGTATACAGTGACTTGCTTGCGAAATATAAAGGCAAAATTGTTTGTGGTGAAAAATCGTTTGACTCTTCGCATCTCTTATCTTTCGCTAAGAAACAAATGGATTACATTCTAGGGAAAAACCCACTAGGAAGATCGTACATGGTAGGATTTGGAAAGAACCCACCAACGCAACCTCACCATAGAGGTGCTTCGGTGCCAACACTGAAAAAGGGTGAAGAAAATGTGCCTTGTGGCCTCACCTTCACAAAATGGTTTCTGATAGATGCACCTAACCCTCATGAACTCACTGGTGCCATTGTGGGTGGAGCTGATCGAGAAGACAAGTTCAAGGACAAACGTTGGGAGTCACCCTACACTGAACCATGCACCTACGTTAATTCCCTAGCTGCTGGAGTTCTTGCAAGGCTTGCATCTTTGTACTGA 1455 0.4467 MGNRQVYLAIIIAWLTLFEGNMMLVNGDLNYKEALTKSLIFLEAQRSGKLPSSNRVPWRGDSGLDDGKLVNVDLVGGYYDAGDNVKYGLPMAFTVTTLAWAAIFYKEEFKEAKEHDHLLAAIRWGTDYFLKCSSRRKRLYVEVGDAEEDHKCWMPPEYMKTKRTVKKIGDGTAGSEIAAETAAAMAASSIVFRPKNRKYARTLLNKAKTLFHMAKSHKGTYDGECPFYCSYSGYNDEMMWAATWLYMATRKSTYLKYILEDSKSASVAEFSWDLKYAGAQVLLSQLYFEGEKKFEKFKNHAESFMCSVLPESPYNQITMSPGGYIHLRNGANSQYATSSAYLFIVYSDLLAKYKGKIVCGEKSFDSSHLLSFAKKQMDYILGKNPLGRSYMVGFGKNPPTQPHHRGASVPTLKKGEENVPCGLTFTKWFLIDAPNPHELTGAIVGGADREDKFKDKRWESPYTEPCTYVNSLAAGVLARLASLY 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03232 484 PANTHER ENDO-1,4-BETA-GLUCANASE 21 482 - -
Viun9g03232 484 Pfam Glycosyl hydrolase family 9 31 477 IPR001701 GO:0004553|GO:0005975
Viun9g03232 484 FunFam Endoglucanase 27 484 - -
Viun9g03232 484 SUPERFAMILY Six-hairpin glycosidases 28 483 IPR008928 GO:0005975
Viun9g03232 484 Gene3D - 26 484 IPR012341 GO:0005975
Viun9g03232 484 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 379 405 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03232 Viun-Chr9 39364735 39367807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g03232 21 482 Glycoside Hydrolase AT3G43860 67.527 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03232 K01179 - gmx:100811509 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03232 9 39364735 39367807 Viun9g03232 9 39364735 39367807 ECH