Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03230 ATGCTGCTCTTGCTTTTTCATGAAAATATGGGCTTAGTCTGCAGCAAAAGGCGACGTTTTCGTGATGCTGATGCTGAAGAAAATGCTCAGGATGCCGAAATTGAAAGAAGAATCGAGTTAGAAACAAAGGCTGAAAAACATATTCAGAAACTTCTACTATTAGGTGCTGGAGAGTCTGGGAAGTCTACAATCTTTAAGCAGATAAAACTTTTGTTCCAAACTGGCTTTGACGATGCTGAGCTTAAAAGCTACATACCCGTCATTCATGCTAATGTGTTTCAGACAATAAAAGTACTGCATGATGGGTCGAAAGAGTTGGCGCAGAATGATGCTGATTCTTCAAAGTACGTAATATCTAATGAAAACCAGGACATTGGGGAAAAGCTCTCAGACATAGGAGGGAGGTTAGATTACCCGCGTCTTACGAAGGATCTTGCGCAGGAAATTGAGACTCTGTGGGAGGATGCTGCAATTCAGGAAACATATGCCCGTGCTAACGAACTCCAAGTTCCAGATTGTACCCATTATTTCATGGAAAATTTGGAGAGGCTGTCTGATGCAAATTATGTTCCAACAAAGGAGGATGTTTTGTATGCAAGAGTCCGTACAACTGGTGTTGTCGAGATCCAATTCAGTCCTGTTGGAGAAAATAAGAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGTGGCCAAAGAAATGAGAGGAGAAAGTGGATCCATCTCTTTGAAGGAGTTACAGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAAACACTTTATGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTTCTGAAGCAACCATGTTTTGAGGTTCCGCTCAATGTGTGTGAGTGGTTCAAAGAATACCAACCAGTTTCAACAGGGAAGCAAGAGATCGAACATGCGTACGAGTTTGTGAAGAAAAAGTTTGAGGAATTGTATTTCCAGAGCATTGCTCCTGATCACGTAGATCGTGTGTTCAAGATCTACCGAACCACTGCTCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGACGAGACTTTGAGACGAAGGAATCTGTTTGAAGCTGGTTTATTATGA 1122 0.4135 MLLLLFHENMGLVCSKRRRFRDADAEENAQDAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDDAELKSYIPVIHANVFQTIKVLHDGSKELAQNDADSSKYVISNENQDIGEKLSDIGGRLDYPRLTKDLAQEIETLWEDAAIQETYARANELQVPDCTHYFMENLERLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLYEDENKNRMMETKELFEWVLKQPCFEVPLNVCEWFKEYQPVSTGKQEIEHAYEFVKKKFEELYFQSIAPDHVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03230 373 FunFam Guanine nucleotide-binding protein alpha-1 subunit 77 202 - -
Viun9g03230 373 Pfam G-protein alpha subunit 31 361 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 SUPERFAMILY Transducin (alpha subunit), insertion domain 76 201 IPR011025 GO:0007165
Viun9g03230 373 Gene3D - 77 202 IPR011025 GO:0007165
Viun9g03230 373 PRINTS Alpha G protein (transducin) signature 189 211 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 PRINTS Alpha G protein (transducin) signature 246 274 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 PRINTS Alpha G protein (transducin) signature 224 241 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 PRINTS Alpha G protein (transducin) signature 50 65 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 ProSiteProfiles G-alpha domain profile. 47 373 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 370 IPR027417 -
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 86 99 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 209 224 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 325 337 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 101 115 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 125 139 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 36 45 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 PRINTS Plant G protein alpha subunit signature 308 323 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Viun9g03230 373 FunFam Guanine nucleotide-binding protein subunit alpha 195 373 - -
Viun9g03230 373 Gene3D - 50 361 IPR027417 -
Viun9g03230 373 CDD G-alpha 49 367 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 SMART galpha_1 28 372 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun9g03230 373 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 289 369 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03230 Viun-Chr9 39359708 39364580 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03230 K19729 - gmx:547804 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03230 9 39359708 39364580 Viun9g03230 9 39359708 39364580 ECH