Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g03220 ATGAACTTATCCAAGAAAGGATCCCAAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACAACTCTGAATCCAAATGCAGCAGAGTTTATTCCTTTTGCCCTCAGATCATCATCATTACCTGGGACTACCAGCTCGGTAGATGCAACAGCAGCAGGGCTTTCGGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCATCAATACTGGCGATGTCAGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAATCTCAAGGTCTGGATGATCTTCCTTTAGCAGGTTTATCCATACATGAGGACAATGAAGCCTCCAGGTTTCCTTCTTCCAAAGGAAGTAAATATATAATAAATGAGCAGCAGGAAATATCTCAACCGCATAATAATGGCAATAGCTTTGTAGATAAAATAGGGTTTTCCCATTCAAGCTACAGGGAGGACCCATCTTCTACAAGCTTTTTGAATGCTCTGGCAAAGCCTTGGGAGGGGCCAATTGGGAGCGCTGACCAGCTTGTTAGCAGTGGTCAAGAGGGGATTGCTTATGATGACAACAGTAGACATGGATACTTAAATGATGTTTTGGCTGAAAATGCAATTATGGATGATACAGATTTGAATCCTTTGGAGTATTTAGCTTCCCTGTTCCCTGGTTTTGCAGCAGAAAGCCTCGCAGAAGCTTACTTTGCCAATGGATGTGATTTACATCTGACCACTGAGATGCTCAGTCAGTTAGAGCTTCAAGTTGATGGTGGTTTCAATCAAACTTTGAATTCAAAGACTCTGTCAGCTCCCAATCTGAGTGCAATGGACTTTCCTTCACTTACTTCACCAGATGGCCAGGCTGCTTCAGTTAAATACGTGGTTGATAATGTCCAGCAAAGCCGAAATCCTTACCAGTCATTTGACAGTGATGTGATGCTTTTCAAATCTAGCTCTTCAGTTCCATCTAGAGGTGCTGTTGACTTTGCTTCAGCTGTTAGAAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAGTATGACAAGAATGGCTCTGGTGATGCTGCTATAGGTTCAAGTAGGAATTCAAATGTTTTGGGTAGTGGCTACAATGGTGGACAGGCCAGAGCACACTTTGGTGATCGATTGCAGAACCGTGGCTCAGCTCGGGCAGCTCCTATTTGGCTTGATACCGGTGATGCTGTTGCAAATATGTATTCAGAGCTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGTAATGCATATTTTGAGCAGGCTCGTCAAGCTTACCTTATTGGTAATAAAGCCCTGGCAAAGGAACTAAGTGCTAAAGGGCAGCTTCACAACATGCATATGAAGGCAGCTCATGGAAAAGCTCAAGAATCCATTTACCGTCAGAGAAATCCAGTTGCTTCAGAGATGCAGGGCAATGGAAGAGGACACGAGAGGATAATAGACCTACATGGGTTGCATGCGAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCTGAGCAGCGTTTGCAGGTGTATATTTGTGTGGGCACAGGTCATCATACCAGGGGTTCCCGCACTCCCGCAAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGACTTCACGGAACCTCAGCCAGGCCTACTTCGCGTTGTGATATATTGA 1740 0.4471 MNLSKKGSQTDAKLLSPNKATTLNPNAAEFIPFALRSSSLPGTTSSVDATAAGLSAAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDESQGLDDLPLAGLSIHEDNEASRFPSSKGSKYIINEQQEISQPHNNGNSFVDKIGFSHSSYREDPSSTSFLNALAKPWEGPIGSADQLVSSGQEGIAYDDNSRHGYLNDVLAENAIMDDTDLNPLEYLASLFPGFAAESLAEAYFANGCDLHLTTEMLSQLELQVDGGFNQTLNSKTLSAPNLSAMDFPSLTSPDGQAASVKYVVDNVQQSRNPYQSFDSDVMLFKSSSSVPSRGAVDFASAVRKLASQDSGGIWKYDKNGSGDAAIGSSRNSNVLGSGYNGGQARAHFGDRLQNRGSARAAPIWLDTGDAVANMYSELREEARDHACLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRNPVASEMQGNGRGHERIIDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFTEPQPGLLRVVIY 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g03220 579 SMART DUF1771_2 417 482 IPR013899 -
Viun9g03220 579 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g03220 579 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 579 - -
Viun9g03220 579 CDD CUE_CID7_like 224 266 IPR041806 -
Viun9g03220 579 ProSiteProfiles Smr domain profile. 498 579 IPR002625 -
Viun9g03220 579 Pfam Domain of unknown function (DUF1771) 418 481 IPR013899 -
Viun9g03220 579 Gene3D - 465 578 IPR036063 -
Viun9g03220 579 SUPERFAMILY SMR domain-like 496 577 IPR036063 -
Viun9g03220 579 SMART SMR_2 495 579 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g03220 Viun-Chr9 39322884 39328458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g03220 - - gmx:100814198 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g03220 9 39322884 39328458 Viun9g03220 9 39322884 39328458 ECH